RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IL34Q6ZMJ4 242 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 KCTD9Q7L273 389 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 ADAM30Q9UKF2 790 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 SSR3Q9UNL2 185 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 RBMX2Q9Y388 322 aaKnown RBP17.21■□□□□ 0.35
C9orf3-213ENST00000471978 PRELID3BQ9Y3B1 194 aa17.21■□□□□ 0.35
C9orf3-213ENST00000471978 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
C9orf3-213ENST00000471978 TNCP24821 2201 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 SLC22A5O76082 557 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 ATP6V1G2O95670 118 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 CD36P16671 472 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 TATDN3Q17R31 274 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 RPEL1Q2QD12 228 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 OR2B11Q5JQS5 317 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 SFXN4Q6P4A7 337 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 CNIH2Q6PI25 160 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 SGPP2Q8IWX5 399 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 MUC7Q8TAX7 377 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 LGALS14Q8TCE9 139 aa17.2■□□□□ 0.34
C9orf3-213ENST00000471978 MRPS7Q9Y2R9 242 aaKnown RBP17.2■□□□□ 0.34
C9orf3-213ENST00000471978 IGKV1D-13A0A0B4J2D9 117 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 H0Y980 276 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 IGLV2-14P01704 120 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 PRH1P02810 166 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 IGKV1-13P0DP09 117 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 RPL30P62888 115 aaKnown RBP17.19■□□□□ 0.34
C9orf3-213ENST00000471978 RHOGP84095 191 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 MMD2Q8IY49 270 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 SNAPC3Q92966 411 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 SPIN2AQ99865 258 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 SPIN2BQ9BPZ2 258 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 Q9H521 79 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 AKIP1Q9NQ31 210 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 ANXA10Q9UJ72 324 aa17.19■□□□□ 0.34
C9orf3-213ENST00000471978 SSX5O60225 188 aa17.18■□□□□ 0.34
C9orf3-213ENST00000471978 SDC2P34741 201 aa17.18■□□□□ 0.34
C9orf3-213ENST00000471978 YTHDF1Q9BYJ9 559 aaKnown RBP17.18■□□□□ 0.34
C9orf3-213ENST00000471978 OR51E2Q9H255 320 aa17.18■□□□□ 0.34
C9orf3-213ENST00000471978 RHBDL2Q9NX52 303 aa17.18■□□□□ 0.34
C9orf3-213ENST00000471978 FAM223BA6NKX1 122 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 A8MZ25 164 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 CSN3P07498 182 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 ZNF45Q02386 682 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 ATP5G2Q06055 141 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 C10orf55Q5SWW7 151 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 FAM223AQ8IWN6 122 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 VKORC1L1Q8N0U8 176 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 HSD17B10Q99714 261 aaKnown RBP17.17■□□□□ 0.34
C9orf3-213ENST00000471978 C19orf73Q9NVV2 129 aa17.17■□□□□ 0.34
C9orf3-213ENST00000471978 TRBV9A0A0B4J1U6 114 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 OR2A4O95047 310 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 MXD1Q05195 221 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 EXOSC2Q13868 293 aaKnown RBP17.16■□□□□ 0.34
C9orf3-213ENST00000471978 TTC9CQ8N5M4 171 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 OR4S2Q8NH73 311 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 TCTEX1D2Q8WW35 142 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 TM2D3Q9BRN9 247 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 SIGLEC8Q9NYZ4 499 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 SPATA2Q9UM82 520 aa17.16■□□□□ 0.34
C9orf3-213ENST00000471978 CLEC2LP0C7M8 214 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 CASC10Q5T4H9 136 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 LCN12Q6JVE5 192 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 ZNF773Q6PK81 442 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 NECAP1Q8NC96 275 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 TAS2R8Q9NYW2 309 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 PEMTQ9UBM1 199 aa17.15■□□□□ 0.34
C9orf3-213ENST00000471978 DYNC2H1Q8NCM8 4307 aaKnown RBP17.15■□□□□ 0.34
C9orf3-213ENST00000471978 BMPR1BO00238 502 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 ARPC4P59998 168 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 EIF4EBP1Q13541 118 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-213ENST00000471978 SLC25A42Q86VD7 318 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 Q8N402 240 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 MFSD4AQ8N468 514 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 OR5H6Q8NGV6 325 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 VSTM2AQ8TAG5 236 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 OR2A7Q96R45 310 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 RNF167Q9H6Y7 350 aa17.14■□□□□ 0.33
C9orf3-213ENST00000471978 TRAV18A0A075B6X5 111 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.13■□□□□ 0.33
C9orf3-213ENST00000471978 LOC100506127A0A0U1RQW1 187 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 HMX3A6NHT5 357 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 KBTBD11O94819 623 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 SCAND1P57086 179 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 BRWD1-AS2P59051 145 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 IDNKQ5T6J7 187 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 GTSCR1Q86UQ5 136 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 BEST4Q8NFU0 473 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 SLC25A38Q96DW6 304 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 ZNF257Q9Y2Q1 563 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 ETV7Q9Y603 341 aa17.13■□□□□ 0.33
C9orf3-213ENST00000471978 IZUMO1RA6ND01 250 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 TEX22C9J3V5 150 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 AIREO43918 545 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 OR2J3O76001 311 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 LYL1P12980 280 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 C15orf32Q32M92 178 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 ZNF66Q6ZN08 573 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 PUSL1Q8N0Z8 303 aaKnown RBP17.12■□□□□ 0.33
C9orf3-213ENST00000471978 GVQW1Q8N7I0 195 aa17.12■□□□□ 0.33
C9orf3-213ENST00000471978 TMEM167AQ8TBQ9 72 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms