RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZP3P21754 424 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 RELBQ01201 579 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 COL10A1Q03692 680 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 GNMTQ14749 295 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 ZNF561Q8N587 486 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 LSM10Q969L4 123 aaKnown RBP14.28□□□□□ -0.12
MRPL28-208ENST00000469744 COQ2Q96H96 371 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 TRBV23-1A0A0A0MS06 115 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 C12orf77C9JDV5 145 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 M0R1W7 72 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 CRYBA1P05813 215 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 SAA4P35542 130 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 CEACAM6P40199 344 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 NKX2-1P43699 371 aaPredicted RBP14.27□□□□□ -0.12
MRPL28-208ENST00000469744 IER3P46695 156 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 FAM74A1Q5RGS3 127 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 TMEM86BQ8N661 226 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 UBAC2Q8NBM4 344 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 DMBX1Q8NFW5 382 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 SAT2Q96F10 170 aaPredicted RBP14.27□□□□□ -0.12
MRPL28-208ENST00000469744 SNX22Q96L94 193 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 ARV1Q9H2C2 271 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 FAM212BQ9NTI7 297 aaPredicted RBP14.27□□□□□ -0.12
MRPL28-208ENST00000469744 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.12
MRPL28-208ENST00000469744 C1RLQ9NZP8 487 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 FBXL17Q9UF56 701 aa14.27□□□□□ -0.12
MRPL28-208ENST00000469744 RCL1Q9Y2P8 373 aaKnown RBP14.27□□□□□ -0.12
MRPL28-208ENST00000469744 TRAV39A0A0B4J263 110 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 A0A1B0GU03 582 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
MRPL28-208ENST00000469744 ZNF737O75373 536 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 ERVFRD-1P60508 538 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 RPL31P62899 125 aaKnown RBP14.26□□□□□ -0.13
MRPL28-208ENST00000469744 HTD2P86397 168 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 ID3Q02535 119 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 KRBOX4Q5JUW0 171 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 SHISA2Q6UWI4 295 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 C1orf122Q6ZSJ8 110 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 TCTEX1D1Q8N7M0 179 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 C17orf50Q8WW18 174 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 DSCAML1Q8TD84 2053 aa14.26□□□□□ -0.13
MRPL28-208ENST00000469744 RAB19A4D1S5 217 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 SERPINE2P07093 398 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 FBP1P09467 338 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 CCL3L1P16619 93 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 AESQ08117 197 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 TMEM200BQ69YZ2 307 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 RPL7L1Q6DKI1 246 aaKnown RBP14.25□□□□□ -0.13
MRPL28-208ENST00000469744 UQCC3Q6UW78 93 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 ZNF645Q8N7E2 425 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 OR1L1Q8NH94 360 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 ZNRD1Q9P1U0 126 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 RBM7Q9Y580 266 aaKnown RBP14.25□□□□□ -0.13
MRPL28-208ENST00000469744 BORCS7-ASMTA0A0B4J1R7 106 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 MGST3O14880 152 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 PITX3O75364 302 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 HBZP02008 142 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 UBE2E1P51965 193 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 ZNF273Q14593 569 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 NCR3LG1Q68D85 454 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 STPG2Q8N412 459 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 SGMS2Q8NHU3 365 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 SLC25A31Q9H0C2 315 aa14.25□□□□□ -0.13
MRPL28-208ENST00000469744 TNFSF12O43508 249 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 OR8U9P0C7N5 309 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 GZMHP20718 246 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 PAX6P26367 422 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 PRR18Q8N4B5 295 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 DRAM1Q8N682 238 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 OR8U1Q8NH10 309 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 OR4F5Q8NH21 305 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 TMED6Q8WW62 240 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 MARC2Q969Z3 335 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 OR2S2Q9NQN1 319 aa14.24□□□□□ -0.13
MRPL28-208ENST00000469744 K7N7A8 449 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 SPINT2O43291 252 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 COX7A1P24310 79 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 SULT1A2P50226 295 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 EIF4EBP1Q13541 118 aaPredicted RBP14.23□□□□□ -0.13
MRPL28-208ENST00000469744 FAM219AQ8IW50 185 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 C11orf42Q8N5U0 333 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 GINS3Q9BRX5 216 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 RAB9BQ9NP90 201 aa14.23□□□□□ -0.13
MRPL28-208ENST00000469744 KIAA2026Q5HYC2 2103 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 C15orf65H3BRN8 121 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 TEX46H3BTG2 121 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 SEC11BP0C7V7 166 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 GLIPR1P48060 266 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 EDDM3BP56851 147 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 VAMP2P63027 116 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 OR51H1Q8NH63 302 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 MRGPRDQ8TDS7 321 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 WFDC12Q8WWY7 111 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 ARL11Q969Q4 196 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 GPR146Q96CH1 333 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 SMIM8Q96KF7 97 aa14.22□□□□□ -0.13
MRPL28-208ENST00000469744 LYRM2Q9NU23 88 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms