RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TCF23Q7RTU1 214 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 P2RX4Q99571 388 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 RRHO14718 337 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 IGHV1-46P01743 117 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-205ENST00000469687 ZNF674Q2M3X9 581 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 CT45A1Q5HYN5 189 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 IQCF2Q8IXL9 164 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 PRSS33Q8NF86 280 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 CT45A3Q8NHU0 189 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 RAB24Q969Q5 203 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 SNRNP40Q96DI7 357 aaKnown RBP12.12□□□□□ -0.47
CBWD3-205ENST00000469687 SIRT7Q9NRC8 400 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 TNCP24821 2201 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 A8MXE2 369 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 AP4M1O00189 453 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 CYB5BO43169 146 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-205ENST00000469687 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-205ENST00000469687 OR4A16Q8NH70 328 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 DDB2Q92466 427 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 APC2O95996 2303 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 IFNA1P01562 189 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 CD40P25942 277 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 TNFAIP6P98066 277 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-205ENST00000469687 RELBQ01201 579 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-205ENST00000469687 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 ABHD12Q8N2K0 398 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
CBWD3-205ENST00000469687 S1PR3Q99500 378 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 CCL13Q99616 98 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 SFXN3Q9BWM7 321 aa12.11□□□□□ -0.47
CBWD3-205ENST00000469687 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 CLN5O75503 358 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 MMP23AO75900 390 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 IFNA10P01566 189 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 GYPAP02724 150 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 CD1BP29016 333 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 GATA4P43694 442 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-205ENST00000469687 STUMQ69YW2 141 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
CBWD3-205ENST00000469687 FAM216BQ8N7L0 139 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 SEBOXQ9HB31 216 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-205ENST00000469687 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 ZNRD1Q9P1U0 126 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
CBWD3-205ENST00000469687 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 B4DEV8 164 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 YIF1AO95070 293 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
CBWD3-205ENST00000469687 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-205ENST00000469687 SPCS3P61009 180 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 FAM57AQ8TBR7 257 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 GAFA1Q96PS6 74 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 ACTR3CQ9C0K3 210 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-205ENST00000469687 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 KBTBD11-OT1A0A1B0GTJ5 212 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 GFRA3O60609 400 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 MBP02144 154 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 TRGC2P03986 189 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 MYOD1P15172 320 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 COL8A2P25067 703 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 GNG10P50151 68 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 ERVK-16P61578 105 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 ADIRFQ15847 76 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 C3orf36Q3SXR2 165 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-205ENST00000469687 WDR83OSQ9Y284 106 aa12.09□□□□□ -0.47
CBWD3-205ENST00000469687 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 RBFOX2O43251 390 aaKnown RBP eCLIP12.08□□□□□ -0.48
CBWD3-205ENST00000469687 PAGE4O60829 102 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 PSMB3P49720 205 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 LYG1Q8N1E2 194 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 OR4F5Q8NH21 305 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 SDSLQ96GA7 329 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 OR4F4Q96R69 305 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 IL19Q9UHD0 177 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 SH3BGRL2Q9UJC5 107 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 PTPRZ1P23471 2315 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-205ENST00000469687 PRSS46E5RG02 174 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 CLDN34H7C241 214 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-205ENST00000469687 RND2P52198 227 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 CCL8P80075 99 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 TREML4Q6UXN2 200 aa12.08□□□□□ -0.48
CBWD3-205ENST00000469687 ZNF383Q8NA42 475 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms