RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TCF23Q7RTU1 214 aa9.45□□□□□ -0.9
HPS1-208ENST00000467246 Q8TCH9 128 aa9.45□□□□□ -0.9
HPS1-208ENST00000467246 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
HPS1-208ENST00000467246 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
HPS1-208ENST00000467246 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 BTBD17A6NE02 478 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 RPS10P46783 165 aaKnown RBP9.44□□□□□ -0.9
HPS1-208ENST00000467246 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 CT45A1Q5HYN5 189 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 CT45A3Q8NHU0 189 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 PUS1Q9Y606 427 aaKnown RBP eCLIP9.44□□□□□ -0.9
HPS1-208ENST00000467246 DYSFO75923 2080 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 IGHV2-5P01817 119 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 SSX7Q7RTT5 188 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 TAF15Q92804 592 aaKnown RBP eCLIP9.44□□□□□ -0.9
HPS1-208ENST00000467246 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
HPS1-208ENST00000467246 CEBPZOSA8MTT3 80 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 HPRT1P00492 218 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 ELLP55199 621 aaPredicted RBP9.43□□□□□ -0.9
HPS1-208ENST00000467246 ICAM4Q14773 271 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 CLDND2Q8NHS1 167 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
HPS1-208ENST00000467246 ZNF665Q9H7R5 613 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 ZZEF1O43149 2961 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 RAI1Q7Z5J4 1906 aaPredicted RBP9.43□□□□□ -0.9
HPS1-208ENST00000467246 TRGV10A0A0A0MS01 117 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 C17orf100A8MU93 164 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 MMP23AO75900 390 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 IRF2P14316 349 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 FGF8P55075 233 aaPredicted RBP9.43□□□□□ -0.9
HPS1-208ENST00000467246 CASP6P55212 293 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 C15orf54Q8N8G6 183 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 OR10D4PQ8NGN7 298 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 WFIKKN1Q96NZ8 548 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 HIPK2Q9H2X6 1198 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 METTL1Q9UBP6 276 aaKnown RBP9.43□□□□□ -0.9
HPS1-208ENST00000467246 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
HPS1-208ENST00000467246 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 AP4M1O00189 453 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 TMPRSS2O15393 492 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 SCAF4O95104 1147 aaKnown RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 MDKP21741 143 aaPredicted RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 RAB2AP61019 212 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 RCC1LQ96I51 464 aaKnown RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 UNKLQ9H9P5 680 aaKnown RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 POLEQ07864 2286 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 HCFC1P51610 2035 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 SAA2-SAA4A0A096LPE2 208 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 ZNF729A6NN14 1252 aaPredicted RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 IFNA17P01571 189 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 HBE1P02100 147 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 SAA2P0DJI9 122 aaPredicted RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 SERF2P84101 59 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 KIAA0141Q14154 515 aaPredicted RBP9.42□□□□□ -0.9
HPS1-208ENST00000467246 RNF212Q495C1 297 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 PRAMEF5Q5TYX0 476 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 OR10P1Q8NGE3 313 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 S1PR3Q99500 378 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
HPS1-208ENST00000467246 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 IGKV1D-33P01593 117 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 IGKV1-33P01594 117 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 GNG10P50151 68 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 GAMTQ14353 236 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZNF506Q5JVG8 444 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 DDB2Q92466 427 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 CIB3Q96Q77 187 aaPredicted RBP9.41□□□□□ -0.9
HPS1-208ENST00000467246 PARD6GQ9BYG4 376 aaPredicted RBP9.41□□□□□ -0.9
HPS1-208ENST00000467246 TNFRSF1AP19438 455 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZNF787Q6DD87 383 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 LYG1Q8N1E2 194 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 NEUROG1Q92886 237 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZNRD1Q9P1U0 126 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 YLPM1P49750 1951 aaKnown RBP9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZFP92A6NM28 416 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
HPS1-208ENST00000467246 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
HPS1-208ENST00000467246 FOLR2P14207 255 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 RAB7AP51149 207 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 TLE1Q04724 770 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 TFF3Q07654 80 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZNF124Q15973 351 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms