RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 AKAIN1P0CW23 69 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 OPN1MW2P0DN77 364 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 OPN1MW3P0DN78 364 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 S100GP29377 79 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 ETV6P41212 452 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 NDPQ00604 133 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 PJVKQ0ZLH3 352 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 PHLDA2Q53GA4 152 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 NDUFA11Q86Y39 141 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 Q8N402 240 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 POC5Q8NA72 575 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 TERB2Q8NHR7 220 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 CD300LFQ8TDQ1 290 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 TSSC4Q9Y5U2 329 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-205ENST00000464493 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 DISC1C4P0D8 188 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 G3V318 75 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 CNIH1O95406 144 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 HPRT1P00492 218 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 HRASP01112 189 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 ZNF735P0CB33 412 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 SAA1P0DJI8 122 aaPredicted RBP11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 EGR2P11161 476 aaPredicted RBP11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 GNB1P62873 340 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 CFHR3Q02985 330 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 TMEM267Q0VDI3 215 aaPredicted RBP11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 FXYD3Q14802 87 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 ZNF79Q15937 498 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 SCGB2B2Q4G0G5 96 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 FAAP20Q6NZ36 180 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 IDO2Q6ZQW0 420 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 VKORC1L1Q8N0U8 176 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 FBXO7Q9Y3I1 522 aa11.39□□□□□ -0.59
SQSTM1-205ENST00000464493 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 ARPC1BO15143 372 aaKnown RBP11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 OR2A4O95047 310 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 IGHG4P01861 327 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 ELANEP08246 267 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 PGAM2P15259 253 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 F2RP25116 425 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 FOXE3Q13461 319 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 PRSS8Q16651 343 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 MRGPRG-AS1Q2M3A8 158 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 AKIRIN2Q53H80 203 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 KHDC1LQ5JSQ8 128 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 VSTM2AQ8TAG5 236 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 ARPC1AQ92747 370 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 ZNF486Q96H40 463 aaPredicted RBP11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 RHOVQ96L33 236 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 OR2A7Q96R45 310 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 FAM103A1Q9BTL3 118 aaKnown RBP11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 NUBP2Q9Y5Y2 271 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 WNK1Q9H4A3 2382 aa11.38□□□□□ -0.59
SQSTM1-205ENST00000464493 A0A1W2PRX2 142 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 TSPAN15O95858 294 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 PPP5CP53041 499 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 TAS2R31P59538 309 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 CXorf66Q5JRM2 361 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 TBC1D26Q86UD7 250 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 TCTEX1D1Q8N7M0 179 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 GRPEL2Q8TAA5 225 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 ZFAND1Q8TCF1 268 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 ZNF430Q9H8G1 570 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 PLEKHA2Q9HB19 425 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 SLC2A9Q9NRM0 540 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 ZFP57Q9NU63 452 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 TNCP24821 2201 aa11.37□□□□□ -0.59
SQSTM1-205ENST00000464493 MPPED1O15442 326 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 ACTL6BO94805 426 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 RPLP1P05386 114 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 NQO2P16083 231 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 PI3P19957 117 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 PSMB8P28062 276 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 ECI1P42126 302 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 AP3S2P59780 193 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 RPL23AP62750 156 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 TNXAQ16473 311 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 PUSL1Q8N0Z8 303 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 RNF152Q8N8N0 203 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 OR51S1Q8NGJ8 323 aa11.36□□□□□ -0.59
SQSTM1-205ENST00000464493 FAM110DQ8TAY7 271 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms