RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PRR25Q96S07 402 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 CMSS1Q9BQ75 279 aaKnown RBP4.12□□□□□ -1.75
CD46-211ENST00000464082 GNB4Q9HAV0 340 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 C12orf4Q9NQ89 552 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD46-211ENST00000464082 ZFP57Q9NU63 452 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 NECAP2Q9NVZ3 263 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 PIPOXQ9P0Z9 390 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 ZNF230Q9UIE0 474 aaPredicted RBP4.12□□□□□ -1.75
CD46-211ENST00000464082 RAB22AQ9UL26 194 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 BLOC1S6Q9UL45 172 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 LRRC42Q9Y546 428 aa4.12□□□□□ -1.75
CD46-211ENST00000464082 STAB2Q8WWQ8 2551 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 TRBV6-7A0A0A0MS04 114 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 SRRM4A7MD48 611 aaKnown RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 TRDCB7Z8K6 153 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 I3L521 148 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RRHO14718 337 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 ARPC1BO15143 372 aaKnown RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 FABP7O15540 132 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 SSX5O60225 188 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RGS11O94810 467 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 DIRAS3O95661 229 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 HIST1H1DP16402 221 aaKnown RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 GADD45AP24522 165 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 PSMB9P28065 219 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 HOXD3P31249 432 aaPredicted RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 SDC2P34741 201 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 CEACAM6P40199 344 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 MYCNOSP40205 109 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 CDX1P47902 265 aaPredicted RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 PSMD7P51665 324 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 GNB1P62873 340 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 EIF4EBP1Q13541 118 aaPredicted RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 KIR2DS1Q14954 304 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 PNLIPRP3Q17RR3 467 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 KHDC1LQ5JSQ8 128 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 SFXN4Q6P4A7 337 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 ZNF695Q8IW36 515 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 H1FOOQ8IZA3 346 aaPredicted RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 ZNF491Q8N8L2 437 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 OR4A4PQ8NGN8 299 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 OR5H6Q8NGV6 325 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 LGALS14Q8TCE9 139 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 C4orf3Q8WVX3 66 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 FCGR1BQ92637 280 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 SLC25A38Q96DW6 304 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RAB3CQ96E17 227 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RASL11BQ9BPW5 248 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 YTHDF1Q9BYJ9 559 aaKnown RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 OR51J1Q9H342 316 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 FBXL15Q9H469 300 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 CHMP1AQ9HD42 196 aaPredicted RBP4.11□□□□□ -1.75
CD46-211ENST00000464082 SDHAF2Q9NX18 166 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RDH8Q9NYR8 311 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 ABRACLQ9P1F3 81 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 RNF150Q9ULK6 438 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 STUB1Q9UNE7 303 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 NUBP2Q9Y5Y2 271 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 WSB1Q9Y6I7 421 aa4.11□□□□□ -1.75
CD46-211ENST00000464082 IGKV1D-13A0A0B4J2D9 117 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 TMEM235A6NFC5 223 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 TRIM64CA6NLI5 447 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 CCL24O00175 119 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 PDCD5O14737 125 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 TFAP2AP05549 437 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 IGKV1-13P0DP09 117 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 ZBTB25P24278 435 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 MYL9P24844 172 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 SLC6A1P30531 599 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 LUMP51884 338 aaPredicted RBP4.1□□□□□ -1.75
CD46-211ENST00000464082 BRWD1-AS2P59051 145 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 SLC35B1P78383 322 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 CX3CL1P78423 397 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 RUNX1Q01196 453 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 PJVKQ0ZLH3 352 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 PSG5Q15238 335 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 KCTD21Q4G0X4 260 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 LIN54Q6MZP7 749 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 MRAPQ8TCY5 172 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 CASTOR1Q8WTX7 329 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 NUDCD2Q8WVJ2 157 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 ALX4Q9H161 411 aaPredicted RBP4.1□□□□□ -1.75
CD46-211ENST00000464082 OR2D2Q9H210 308 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 DAPK2Q9UIK4 370 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 MGAT4AQ9UM21 535 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 RRP15Q9Y3B9 282 aaKnown RBP4.1□□□□□ -1.75
CD46-211ENST00000464082 WASHC3Q9Y3C0 194 aa4.1□□□□□ -1.75
CD46-211ENST00000464082 A0A075B6Q4 140 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 TRAV41A0A0B4J266 112 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 M0R1X1 148 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 BET1O15155 118 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 HSPA12AO43301 675 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 RRP9O43818 475 aaKnown RBP4.09□□□□□ -1.75
CD46-211ENST00000464082 RBBP9O75884 186 aa4.09□□□□□ -1.75
CD46-211ENST00000464082 TUSC2O75896 110 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1249.2 ms