RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 PPRC1Q5VV67 1664 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 LMTK2Q8IWU2 1503 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 UGGT2Q9NYU1 1516 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 CACNA1DQ01668 2161 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 ABCC12Q96J65 1359 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 TRPM1Q7Z4N2 1603 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 IQSEC2Q5JU85 1478 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 HECW2Q9P2P5 1572 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ZSWIM8A7E2V4 1837 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ITGB4P16144 1822 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 PRR14LQ5THK1 2151 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ADGBQ8N7X0 1667 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 CPSF1Q10570 1443 aaKnown RBP2.19□□□□□ -2.06
USH2A-203ENST00000463147 LOC105371267A0A1B0GV96 52 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 LINC00862A6NCI5 91 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 CCDC160A6NGH7 325 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 KPNA3O00505 521 aaPredicted RBP2.19□□□□□ -2.06
USH2A-203ENST00000463147 SLC25A20O43772 301 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 STK16O75716 305 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 MYL12AP19105 171 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 EIF2B2P49770 351 aaKnown RBP2.19□□□□□ -2.06
USH2A-203ENST00000463147 RAB5BP61020 215 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 NCALDP61601 193 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 B2MP61769 119 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 SPA17Q15506 151 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 IGFL1Q6UW32 110 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 SBSNQ6UWP8 590 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 NIT1Q86X76 327 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 H1FOOQ8IZA3 346 aaPredicted RBP2.19□□□□□ -2.06
USH2A-203ENST00000463147 PACRGLQ8N7B6 248 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 HIST1H2BAQ96A08 127 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 CAPZA3Q96KX2 299 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 UPK3BQ9BT76 320 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 HES4Q9HCC6 221 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 SLC2A9Q9NRM0 540 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ARMC1Q9NVT9 282 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 SLC22A13Q9Y226 551 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ARL2BPQ9Y2Y0 163 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 ZNF638Q14966 1978 aaKnown RBP2.19□□□□□ -2.06
USH2A-203ENST00000463147 CFTRP13569 1480 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 PZPP20742 1482 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 GRIN2BQ13224 1484 aa2.19□□□□□ -2.06
USH2A-203ENST00000463147 OVOS2A0A0G2JMS6 1433 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 OVOS2A0A0J9YW53 1432 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 DAPK1P53355 1430 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 OVOS2Q6IE36 1432 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 ARHGEF11O15085 1522 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 CDK13Q14004 1512 aaKnown RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 EFCAB6Q5THR3 1501 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 KIAA0586Q9BVV6 1533 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 A0A1B0GU33 70 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 IGSF23A1L1A6 192 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 SMIM9A6NGZ8 99 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 GGTLC3B5MD39 225 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 INMT-MINDY4F8WBC2 141 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 C15orf65H3BRN8 121 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 CHP2O43745 196 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 CRYZL1O95825 349 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 HRES1P13985 223 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 ZNF22P17026 224 aaPredicted RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 CAPZBP47756 277 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 OMPP47874 163 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 TMEM33P57088 247 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 RPL26P61254 145 aaKnown RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 RPS11P62280 158 aaKnown RBP eCLIP2.18□□□□□ -2.06
USH2A-203ENST00000463147 CCL7P80098 99 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 MRPL51Q4U2R6 128 aaKnown RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 HIST2H3PS2Q5TEC6 136 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 FAM173BQ6P4H8 233 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 BAP18Q8IXM2 172 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 DEFB125Q8N687 156 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 ZNF680Q8NEM1 530 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 BPIFB6Q8NFQ5 453 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 PHOSPHO2Q8TCD6 241 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 RASSF5Q8WWW0 418 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 SLC25A44Q96H78 314 aaPredicted RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 CEP19Q96LK0 163 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 TBX5Q99593 518 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 SELENOSQ9BQE4 189 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 C8orf4Q9NR00 106 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 ANAPC10Q9UM13 185 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 LSM5Q9Y4Y9 91 aaKnown RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 DICER1Q9UPY3 1922 aaKnown RBP2.18□□□□□ -2.06
USH2A-203ENST00000463147 MAGI2Q86UL8 1455 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 DNMBPQ6XZF7 1577 aa2.18□□□□□ -2.06
USH2A-203ENST00000463147 BCL9O00512 1426 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 TRAPPC8Q9Y2L5 1435 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 PVALEFA0A1B0GWK0 134 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 FUOMA2VDF0 154 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 C19orf71A6NCJ1 209 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CLDN24A6NM45 220 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 DENRO43583 198 aaKnown RBP2.17□□□□□ -2.06
USH2A-203ENST00000463147 SULT1B1O43704 296 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CRYGDP07320 174 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 ALOX5APP20292 161 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 CRYBB3P26998 211 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 HSD11B1P28845 292 aa2.17□□□□□ -2.06
USH2A-203ENST00000463147 DDTP30046 118 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms