RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 PRRT1Q99946 306 aa10.11□□□□□ -0.79
COL18A1-206ENST00000459895 HRASLSQ9HDD0 168 aa10.11□□□□□ -0.79
COL18A1-206ENST00000459895 AP4M1O00189 453 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 FCN1O00602 326 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.793e-15■■□□□ 14.2
COL18A1-206ENST00000459895 FBXO24O75426 580 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 CD28P10747 220 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 AP3S2P59780 193 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 RND3P61587 244 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 GNB1P62873 340 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 ZNF45Q02386 682 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 CFHR3Q02985 330 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 PJVKQ0ZLH3 352 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 ZNF57Q68EA5 555 aaPredicted RBP10.1□□□□□ -0.79
COL18A1-206ENST00000459895 TERB2Q8NHR7 220 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 ZNF486Q96H40 463 aaPredicted RBP10.1□□□□□ -0.79
COL18A1-206ENST00000459895 OR51J1Q9H342 316 aa10.1□□□□□ -0.79
COL18A1-206ENST00000459895 PSMB11A5LHX3 300 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ARPC1BO15143 372 aaKnown RBP10.09□□□□□ -0.79
COL18A1-206ENST00000459895 KBTBD11O94819 623 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 F2RP25116 425 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 FAUP35544 74 aaKnown RBP10.09□□□□□ -0.79
COL18A1-206ENST00000459895 LGALS7P47929 136 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 PIGPP57054 158 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 CX3CL1P78423 397 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 LIN54Q6MZP7 749 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 LPCAT3Q6P1A2 487 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 SHISA2Q6UWI4 295 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ZNF329Q86UD4 541 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 PPP1R27Q86WC6 154 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 GRPEL2Q8TAA5 225 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ARPC1AQ92747 370 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
COL18A1-206ENST00000459895 COMMD9Q9P000 198 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 ZNF580Q9UK33 172 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 VSIG4Q9Y279 399 aa10.09□□□□□ -0.79
COL18A1-206ENST00000459895 G3V318 75 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 IGF1P05019 195 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 CTSDP07339 412 aaPredicted RBP10.08□□□□□ -0.8
COL18A1-206ENST00000459895 S100GP29377 79 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 CD40LGP29965 261 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 BTCP35070 178 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 ECI1P42126 302 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 SURF2Q15527 256 aaPredicted RBP10.08□□□□□ -0.8
COL18A1-206ENST00000459895 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 C10orf55Q5SWW7 151 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 PUSL1Q8N0Z8 303 aaKnown RBP10.08□□□□□ -0.8
COL18A1-206ENST00000459895 POC5Q8NA72 575 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 RHOVQ96L33 236 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 TP53RKQ96S44 253 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 C5orf66Q9H5L9 145 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
COL18A1-206ENST00000459895 SCP2D1Q9UJQ7 156 aa10.08□□□□□ -0.8
COL18A1-206ENST00000459895 C14orf166Q9Y224 244 aaKnown RBP10.08□□□□□ -0.8
COL18A1-206ENST00000459895 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 MARCH11A6NNE9 402 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 H0Y980 276 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 HPRT1P00492 218 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 IGKV1-39P01597 117 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 IGKV1D-39P04432 117 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-206ENST00000459895 RPA2P15927 270 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 VDAC1P21796 283 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 INPP1P49441 399 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 CRIP2P52943 208 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TAS2R31P59538 309 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TNXAQ16473 311 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 PRSS8Q16651 343 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TEX45Q8NA69 505 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 OR5AU1Q8NGC0 362 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 OR4X2Q8NGF9 303 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 ZFAND1Q8TCF1 268 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 CD300LFQ8TDQ1 290 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 R3HDM4Q96D70 268 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 CITED2Q99967 270 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-206ENST00000459895 RTBDNQ9BSG5 229 aaPredicted RBP10.07□□□□□ -0.8
COL18A1-206ENST00000459895 PLEKHA2Q9HB19 425 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TMEM140Q9NV12 185 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 COPZ2Q9P299 210 aa10.07□□□□□ -0.8
COL18A1-206ENST00000459895 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 ADARB2-AS1A8MUL3 147 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 MPPED1O15442 326 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 OR2A4O95047 310 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 TSPAN15O95858 294 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 HRASP01112 189 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 MYOD1P15172 320 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 NQO2P16083 231 aa10.06□□□□□ -0.8
COL18A1-206ENST00000459895 LPAR6P43657 344 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms