RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PRSS8Q16651 343 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 TCF24Q7RTU0 167 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 NUFIP2Q7Z417 695 aaKnown RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 PPP1R32Q7Z5V6 425 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 ZNF645Q8N7E2 425 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 RAB1CQ92928 201 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 ZNF479Q96JC4 524 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 CHODLQ9H9P2 273 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 TRAPPC2LQ9UL33 140 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 RBM7Q9Y580 266 aaKnown RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 KMT2BQ9UMN6 2715 aaPredicted RBP7.12□□□□□ -1.27
VPS50-208ENST00000458707 TRAV39A0A0B4J263 110 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 ODAMA1E959 279 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 A6NNC1 897 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 C11orf94C9JXX5 98 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 ZNHIT1O43257 154 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 CCL4P13236 92 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 LHX2P50458 406 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 CLDN18P56856 261 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 RPL19P84098 196 aaKnown RBP7.12□□□□□ -1.27
VPS50-208ENST00000458707 PLP2Q04941 152 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 TFF3Q07654 80 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 ZNF146Q15072 292 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 C9orf135Q5VTT2 229 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 TEX38Q6PEX7 206 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 TUSC5Q8IXB3 177 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 TCTEX1D1Q8N7M0 179 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 Q8N7P7 452 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 OR10P1Q8NGE3 313 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 WDYHV1Q96HA8 205 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 CIB3Q96Q77 187 aaPredicted RBP7.12□□□□□ -1.27
VPS50-208ENST00000458707 GP6Q9HCN6 339 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 FKBP11Q9NYL4 201 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
VPS50-208ENST00000458707 C1QTNF9BB2RNN3 333 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 C17orf112F2Z3M2 114 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CCL25O15444 150 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 RAMP3O60896 148 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CYB561P49447 251 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TNFSF10P50591 281 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 PPP1CBP62140 327 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 UBE2V1Q13404 147 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CLEC12BQ2HXU8 276 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 HLA-BQ31612 363 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 RNFT1Q5M7Z0 435 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 FAM78BQ5VT40 261 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 LYSMD4Q5XG99 296 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TMPRSS7Q7RTY8 843 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 WDR86Q86TI4 376 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 LYG1Q8N1E2 194 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 OR1L1Q8NH94 360 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 C5orf30Q96GV9 206 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 ATP6V0BQ99437 205 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TXNDC17Q9BRA2 123 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 KCNIP2Q9NS61 270 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 CLN8Q9UBY8 286 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 BOKQ9UMX3 212 aaPredicted RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 PSG11Q9UQ72 335 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 POLR3KQ9Y2Y1 108 aaPredicted RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 CACNA1DQ01668 2161 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 F6UZH7 168 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 SIRPB1O00241 398 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 RAB29O14966 203 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 ZG16O60844 167 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CLDN14O95500 239 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 PDGFBP01127 241 aaPredicted RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 TDGF1P13385 188 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CA6P23280 308 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 OR10J1P30954 320 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 MC5RP33032 325 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 G6PCP35575 357 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 CXCL12P48061 93 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 BRWD1-AS2P59051 145 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 UBE2NP61088 152 aaKnown RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 YPEL3P61236 119 aaPredicted RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 GNB1P62873 340 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 RPL30P62888 115 aaKnown RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 TLE1Q04724 770 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TRIP6Q15654 476 aaKnown RBP7.11□□□□□ -1.27
VPS50-208ENST00000458707 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 SCCPDHQ8NBX0 429 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TAAR6Q96RI8 345 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 RTL8AQ9BWD3 113 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 SLC35D1Q9NTN3 355 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 ELOVL5Q9NYP7 299 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 POLDIP2Q9Y2S7 368 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 TRAPPC1Q9Y5R8 145 aa7.11□□□□□ -1.27
VPS50-208ENST00000458707 LOC105371242A0A075B767 164 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 A0A0U1RQK1 487 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 ZNF320A2RRD8 509 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 SH2D1BO14796 132 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 KRASP01116 189 aa7.1□□□□□ -1.27
VPS50-208ENST00000458707 ESDP10768 282 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms