RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 VDAC1P21796 283 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 RPS16P62249 146 aaKnown RBP7.02□□□□□ -1.29
RIF1-208ENST00000457745 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
RIF1-208ENST00000457745 ID3Q02535 119 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 PJVKQ0ZLH3 352 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 CATR1Q13166 79 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 C10orf55Q5SWW7 151 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 HAPLN4Q86UW8 402 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 LRRC75A-AS1Q8N1F1 130 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 S1PR3Q99500 378 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 REG4Q9BYZ8 158 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 TMEM140Q9NV12 185 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 TNFSF18Q9UNG2 199 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 TMED3Q9Y3Q3 217 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 HILPDAQ9Y5L2 63 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 MMP24Q9Y5R2 645 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 KPTNQ9Y664 436 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 ITPR3Q14573 2671 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 IGSF23A1L1A6 192 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 RNF212BA8MTL3 300 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 E7EUB6 86 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 TOR1AO14656 332 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 TIMM23O14925 209 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 RBFOX2O43251 390 aaKnown RBP eCLIP7.01□□□□□ -1.29
RIF1-208ENST00000457745 OR2F2O95006 317 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 CFDP00746 253 aaPredicted RBP7.01□□□□□ -1.29
RIF1-208ENST00000457745 IFNA21P01568 189 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 MSMBP08118 114 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 SAA1P0DJI8 122 aaPredicted RBP7.01□□□□□ -1.29
RIF1-208ENST00000457745 IAPPP10997 89 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 SLC25A16P16260 332 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 PSMB6P28072 239 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 RAB13P51153 203 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 AKR1C2P52895 323 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 SRPXP78539 464 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 LOXL1Q08397 574 aaPredicted RBP7.01□□□□□ -1.29
RIF1-208ENST00000457745 ARL16Q0P5N6 197 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 OR4A47Q6IF82 309 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 PRSS54Q6PEW0 395 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 BRD3OSQ6XYD6 125 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 C1orf122Q6ZSJ8 110 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 THNSL2Q86YJ6 484 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 TGIF2LXQ8IUE1 241 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 OR13D1Q8NGV5 346 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 FAM216AQ8WUB2 273 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 TMEM170AQ8WVE7 144 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 LSM10Q969L4 123 aaKnown RBP7.01□□□□□ -1.29
RIF1-208ENST00000457745 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 PLEKHA2Q9HB19 425 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 WFDC1Q9HC57 220 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 RAB9BQ9NP90 201 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 HSPB11Q9Y547 144 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 POMT1Q9Y6A1 747 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 ITPR2Q14571 2701 aa7.01□□□□□ -1.29
RIF1-208ENST00000457745 CCDC168Q8NDH2 2452 aa7□□□□□ -1.29
RIF1-208ENST00000457745 TRAV40A0A0B4J280 105 aa7□□□□□ -1.29
RIF1-208ENST00000457745 DUXBA0A1W2PPF3 345 aa7□□□□□ -1.29
RIF1-208ENST00000457745 FAM24AA6NFZ4 105 aa7□□□□□ -1.29
RIF1-208ENST00000457745 H3BP45 60 aa7□□□□□ -1.29
RIF1-208ENST00000457745 ST8SIA3O43173 380 aa7□□□□□ -1.29
RIF1-208ENST00000457745 SSSCA1O60232 199 aa7□□□□□ -1.29
RIF1-208ENST00000457745 DEDDO75618 318 aa7□□□□□ -1.29
RIF1-208ENST00000457745 VENTXO95231 258 aa7□□□□□ -1.29
RIF1-208ENST00000457745 HPRT1P00492 218 aa7□□□□□ -1.29
RIF1-208ENST00000457745 CRYGBP07316 175 aa7□□□□□ -1.29
RIF1-208ENST00000457745 HKR1P10072 659 aa7□□□□□ -1.29
RIF1-208ENST00000457745 SAA4P35542 130 aa7□□□□□ -1.29
RIF1-208ENST00000457745 AP2S1P53680 142 aaPredicted RBP7□□□□□ -1.29
RIF1-208ENST00000457745 DSCR9P59020 149 aa7□□□□□ -1.29
RIF1-208ENST00000457745 SMCO1Q147U7 214 aa7□□□□□ -1.29
RIF1-208ENST00000457745 SSX2Q16385 188 aa7□□□□□ -1.29
RIF1-208ENST00000457745 POU2AF1Q16633 256 aa7□□□□□ -1.29
RIF1-208ENST00000457745 TMEM177Q53S58 311 aa7□□□□□ -1.29
RIF1-208ENST00000457745 FAM71F2Q6NXP2 309 aa7□□□□□ -1.29
RIF1-208ENST00000457745 C19orf35Q6ZS72 473 aa7□□□□□ -1.29
RIF1-208ENST00000457745 MOB3BQ86TA1 216 aa7□□□□□ -1.29
RIF1-208ENST00000457745 PUSL1Q8N0Z8 303 aaKnown RBP7□□□□□ -1.29
RIF1-208ENST00000457745 BCL6BQ8N143 479 aaPredicted RBP7□□□□□ -1.29
RIF1-208ENST00000457745 OR4S2Q8NH73 311 aa7□□□□□ -1.29
RIF1-208ENST00000457745 DCUN1D4Q92564 292 aa7□□□□□ -1.29
RIF1-208ENST00000457745 HYLS1Q96M11 299 aa7□□□□□ -1.29
RIF1-208ENST00000457745 OR4C12Q96R67 309 aa7□□□□□ -1.29
RIF1-208ENST00000457745 RBKSQ9H477 322 aa7□□□□□ -1.29
RIF1-208ENST00000457745 CYTL1Q9NRR1 136 aa7□□□□□ -1.29
RIF1-208ENST00000457745 FAM212BQ9NTI7 297 aaPredicted RBP7□□□□□ -1.29
RIF1-208ENST00000457745 HIF1ANQ9NWT6 349 aa7□□□□□ -1.29
RIF1-208ENST00000457745 COMMD9Q9P000 198 aa7□□□□□ -1.29
RIF1-208ENST00000457745 ABCA1O95477 2261 aa7□□□□□ -1.29
RIF1-208ENST00000457745 ZANQ9Y493 2812 aa7□□□□□ -1.29
RIF1-208ENST00000457745 A0A0U1RQK1 487 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 A0A1B0GU03 582 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 UPK2O00526 184 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 FCN1O00602 326 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 NPFFO15130 113 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 CHST1O43916 411 aa6.99□□□□□ -1.29
RIF1-208ENST00000457745 OPN1MWP04001 364 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms