RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 IZUMO1RA6ND01 250 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 TUSC2O75896 110 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 RPL30P62888 115 aaKnown RBP20.62■□□□□ 0.89
USP42-204ENST00000451154 ZNF45Q02386 682 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 ATP5G2Q06055 141 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 ARL6IP1Q15041 203 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 OR2B11Q5JQS5 317 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 HACD4Q5VWC8 232 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 ZFAND6Q6FIF0 208 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 OR2W1Q9Y3N9 320 aa20.62■□□□□ 0.89
USP42-204ENST00000451154 STARD9Q9P2P6 4700 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 ACTL6BO94805 426 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 HLA-DQB1P01920 261 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 CDK10Q15131 360 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 C10orf55Q5SWW7 151 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 NUDCD2Q8WVJ2 157 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 THAP7Q9BT49 309 aaPredicted RBP20.61■□□□□ 0.89
USP42-204ENST00000451154 SIGLEC8Q9NYZ4 499 aa20.61■□□□□ 0.89
USP42-204ENST00000451154 IGKV1D-13A0A0B4J2D9 117 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 NOTOA8MTQ0 251 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 BMPR1BO00238 502 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 OR2A4O95047 310 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 CTXN2P0C2S0 81 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 IGKV1-13P0DP09 117 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 HAGHQ16775 308 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 VKORC1L1Q8N0U8 176 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 SPIN2AQ99865 258 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 SPIN2BQ9BPZ2 258 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 TUBA4BQ9H853 241 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 TXNL4BQ9NX01 149 aaKnown RBP20.6■□□□□ 0.89
USP42-204ENST00000451154 RBMX2Q9Y388 322 aaKnown RBP20.6■□□□□ 0.89
USP42-204ENST00000451154 PRELID3BQ9Y3B1 194 aa20.6■□□□□ 0.89
USP42-204ENST00000451154 TRBV9A0A0B4J1U6 114 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 TMEM235A6NFC5 223 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 IGLV2-14P01704 120 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 MECP2P51608 486 aaKnown RBP20.59■□□□□ 0.89
USP42-204ENST00000451154 EXOSC2Q13868 293 aaKnown RBP20.59■□□□□ 0.89
USP42-204ENST00000451154 LCN12Q6JVE5 192 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 KCTD9Q7L273 389 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 MMD2Q8IY49 270 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 TTC9CQ8N5M4 171 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 LYSTQ99698 3801 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 DCSTAMPQ9H295 470 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 RAB26Q9ULW5 256 aa20.59■□□□□ 0.89
USP42-204ENST00000451154 HMX3A6NHT5 357 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 FAM223BA6NKX1 122 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 UBE2UQ5VVX9 321 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 CNIH2Q6PI25 160 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 GTSCR1Q86UQ5 136 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 FAM223AQ8IWN6 122 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 Q8N402 240 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 EDA2RQ9HAV5 297 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 PEMTQ9UBM1 199 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 DAPK2Q9UIK4 370 aa20.58■□□□□ 0.89
USP42-204ENST00000451154 PSMB9P28065 219 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 FGF9P31371 208 aaPredicted RBP20.57■□□□□ 0.88
USP42-204ENST00000451154 GABARAPL2P60520 117 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 ADAMTSL5Q6ZMM2 481 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 SPARTQ8N0X7 666 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 SPATA25Q9BR10 227 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 OR51E2Q9H255 320 aa20.57■□□□□ 0.88
USP42-204ENST00000451154 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.56■□□□□ 0.88
USP42-204ENST00000451154 SSX5O60225 188 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 CREBL2O60519 120 aaPredicted RBP20.56■□□□□ 0.88
USP42-204ENST00000451154 OR2J3O76001 311 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 SLC22A5O76082 557 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 CD36P16671 472 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 NECAP1Q8NC96 275 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 SPATA2Q9UM82 520 aa20.56■□□□□ 0.88
USP42-204ENST00000451154 MRPS7Q9Y2R9 242 aaKnown RBP20.56■□□□□ 0.88
USP42-204ENST00000451154 MRPS14O60783 128 aaKnown RBP20.55■□□□□ 0.88
USP42-204ENST00000451154 BRWD1-AS2P59051 145 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 GNG2P59768 71 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 C19orf35Q6ZS72 473 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 TPRA1Q86W33 373 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 TCTEX1D2Q8WW35 142 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 ISOC1Q96CN7 298 aa20.55■□□□□ 0.88
USP42-204ENST00000451154 RRP15Q9Y3B9 282 aaKnown RBP20.55■□□□□ 0.88
USP42-204ENST00000451154 PPP5D1E7EU14 171 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 AIREO43918 545 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 EIF4EBP1Q13541 118 aaPredicted RBP20.54■□□□□ 0.88
USP42-204ENST00000451154 C15orf32Q32M92 178 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 CD300EQ496F6 205 aaPredicted RBP20.54■□□□□ 0.88
USP42-204ENST00000451154 SLC25A42Q86VD7 318 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 OR2A7Q96R45 310 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 GPHA2Q96T91 129 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 HSD17B10Q99714 261 aaKnown RBP20.54■□□□□ 0.88
USP42-204ENST00000451154 ANXA10Q9UJ72 324 aa20.54■□□□□ 0.88
USP42-204ENST00000451154 TEX22C9J3V5 150 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 E7EUB6 86 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 HLA-AP01891 365 aaKnown RBP20.53■□□□□ 0.88
USP42-204ENST00000451154 IL6RP08887 468 aaPredicted RBP20.53■□□□□ 0.88
USP42-204ENST00000451154 MFSD4AQ8N468 514 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 OR4S2Q8NH73 311 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 LGALS14Q8TCE9 139 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 FYTTD1Q96QD9 318 aaKnown RBP20.53■□□□□ 0.88
USP42-204ENST00000451154 TAS2R8Q9NYW2 309 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 SSR3Q9UNL2 185 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 DMRT1Q9Y5R6 373 aa20.53■□□□□ 0.88
USP42-204ENST00000451154 KBTBD11O94819 623 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms