RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 TRGV3P03979 118 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 AADACP22760 399 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
FAM3A-216ENST00000449971 SSBP2P81877 361 aaPredicted RBP13.56□□□□□ -0.24
FAM3A-216ENST00000449971 TMEM69Q5SWH9 247 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 C9orf66Q5T8R8 295 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 IDO2Q6ZQW0 420 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 TCTEX1D2Q8WW35 142 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 SLC25A46Q96AG3 418 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 MRPS7Q9Y2R9 242 aaKnown RBP13.56□□□□□ -0.24
FAM3A-216ENST00000449971 LYSTQ99698 3801 aa13.56□□□□□ -0.24
FAM3A-216ENST00000449971 LYL1P12980 280 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 TAS2R20P59543 309 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 TNXAQ16473 311 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 PRSS8Q16651 343 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 OR13F1Q8NGS4 319 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 SECTM1Q8WVN6 248 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
FAM3A-216ENST00000449971 PHB2Q99623 299 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 HSD17B10Q99714 261 aaKnown RBP13.55□□□□□ -0.24
FAM3A-216ENST00000449971 SLA2Q9H6Q3 261 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 TAS2R8Q9NYW2 309 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 COMMD3Q9UBI1 195 aa13.55□□□□□ -0.24
FAM3A-216ENST00000449971 MSGN1A6NI15 193 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 LINC01619G3V211 115 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 LGALS1P09382 135 aaKnown RBP13.54□□□□□ -0.24
FAM3A-216ENST00000449971 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 ZFAND6Q6FIF0 208 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 MFSD4AQ8N468 514 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 POC5Q8NA72 575 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 OR5AP2Q8NGF4 316 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 ACOT12Q8WYK0 555 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 SNAPC3Q92966 411 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 RHOVQ96L33 236 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 TMEM68Q96MH6 324 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 RCHY1Q96PM5 261 aa13.54□□□□□ -0.24
FAM3A-216ENST00000449971 DNAH1Q9P2D7 4330 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 TNFSF12O43508 249 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 PPYP01298 95 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 SAA1P0DJI8 122 aaPredicted RBP13.53□□□□□ -0.24
FAM3A-216ENST00000449971 APELAP0DMC3 54 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 FXYD4P59646 89 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 CDK10Q15131 360 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 ZNF66Q6ZN08 573 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 OVCH2Q7RTZ1 564 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 OR4S2Q8NH73 311 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 SLC5A7Q9GZV3 580 aa13.53□□□□□ -0.24
FAM3A-216ENST00000449971 IGHV4OR15-8A0A075B7B6 117 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 A0A087WW49 117 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 LCE6AA0A183 80 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 C13orf42A0A1B0GVH6 325 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 H3BUA1 57 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 ACTL6BO94805 426 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 HSPB1P04792 205 aaKnown RBP13.52□□□□□ -0.25
FAM3A-216ENST00000449971 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
FAM3A-216ENST00000449971 SMIM18P0DKX4 95 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 PRSS3P35030 304 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 SLURP1P55000 103 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 EIF4EBP1Q13541 118 aaPredicted RBP13.52□□□□□ -0.25
FAM3A-216ENST00000449971 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 DLX4Q92988 240 aaPredicted RBP13.52□□□□□ -0.25
FAM3A-216ENST00000449971 ZNF430Q9H8G1 570 aaPredicted RBP13.52□□□□□ -0.25
FAM3A-216ENST00000449971 COA4Q9NYJ1 87 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 SCOCQ9UIL1 159 aa13.52□□□□□ -0.25
FAM3A-216ENST00000449971 SMIM31A0A1B0GVY4 71 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 OVOL1O14753 267 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 MPPED1O15442 326 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 CREBL2O60519 120 aaPredicted RBP13.51□□□□□ -0.25
FAM3A-216ENST00000449971 RORCP51449 518 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 MMD2Q8IY49 270 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
FAM3A-216ENST00000449971 NAA50Q9GZZ1 169 aaKnown RBP13.51□□□□□ -0.25
FAM3A-216ENST00000449971 EHFQ9NZC4 300 aa13.51□□□□□ -0.25
FAM3A-216ENST00000449971 A0A0G2JLM5 398 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 PMP2P02689 132 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 KIR2DS2P43631 304 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 RFX2P48378 723 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 BRWD1-AS2P59051 145 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 HERV-K104P61576 105 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 MSMO1Q15800 293 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 GPR107Q5VW38 600 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 TMEM17Q86X19 198 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 ANKRD13BQ86YJ7 626 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
FAM3A-216ENST00000449971 TINAGL1Q9GZM7 467 aaPredicted RBP13.5□□□□□ -0.25
FAM3A-216ENST00000449971 ANKRD34BA5PLL1 514 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 HPGDSO60760 199 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 OR2A4O95047 310 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 APOA1P02647 267 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 OR9G9P0C7N8 305 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 SPAG16Q8N0X2 631 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 OR5H2Q8NGV7 314 aa13.49□□□□□ -0.25
FAM3A-216ENST00000449971 VSTM2AQ8TAG5 236 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms