RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 IGLV2-14P01704 120 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 HLA-DQB1P01920 261 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 ZNF45Q02386 682 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 CDK10Q15131 360 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 CASC10Q5T4H9 136 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 TM2D3Q9BRN9 247 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 DCUN1D5Q9BTE7 237 aa13.87□□□□□ -0.19
COL9A1-205ENST00000447041 RBMX2Q9Y388 322 aaKnown RBP13.87□□□□□ -0.19
COL9A1-205ENST00000447041 SSX5O60225 188 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 TUSC2O75896 110 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 CSN3P07498 182 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 RHOGP84095 191 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 SFXN4Q6P4A7 337 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 SGPP2Q8IWX5 399 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 DCSTAMPQ9H295 470 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 AKIP1Q9NQ31 210 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 C19orf73Q9NVV2 129 aa13.86□□□□□ -0.19
COL9A1-205ENST00000447041 RRP15Q9Y3B9 282 aaKnown RBP13.86□□□□□ -0.19
COL9A1-205ENST00000447041 ATP6V1G2O95670 118 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 CTXN2P0C2S0 81 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 CD36P16671 472 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 GNG2P59768 71 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 EXOSC2Q13868 293 aaKnown RBP13.85□□□□□ -0.19
COL9A1-205ENST00000447041 CNIH2Q6PI25 160 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 TPRA1Q86W33 373 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 MMD2Q8IY49 270 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 VKORC1L1Q8N0U8 176 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 OR51E2Q9H255 320 aa13.85□□□□□ -0.19
COL9A1-205ENST00000447041 TNCP24821 2201 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 SACSQ9NZJ4 4579 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 STARD9Q9P2P6 4700 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 TRBV9A0A0B4J1U6 114 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 FAM223BA6NKX1 122 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 A8MZ25 164 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 BMPR1BO00238 502 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 CREBL2O60519 120 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-205ENST00000447041 ACTL6BO94805 426 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 EIF4EBP1Q13541 118 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-205ENST00000447041 FAM223AQ8IWN6 122 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 THAP7Q9BT49 309 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-205ENST00000447041 RNF167Q9H6Y7 350 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 ANXA10Q9UJ72 324 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 SSR3Q9UNL2 185 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 MRPS7Q9Y2R9 242 aaKnown RBP13.84□□□□□ -0.19
COL9A1-205ENST00000447041 PRELID3BQ9Y3B1 194 aa13.84□□□□□ -0.19
COL9A1-205ENST00000447041 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 HMX3A6NHT5 357 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 H0Y980 276 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SCGNO76038 276 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 OR2A4O95047 310 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 CLEC2LP0C7M8 214 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SDC2P34741 201 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 MXD1Q05195 221 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 TATDN3Q17R31 274 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 C19orf35Q6ZS72 473 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 TTC9CQ8N5M4 171 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 TCTEX1D2Q8WW35 142 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SNAPC3Q92966 411 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 CITED4Q96RK1 184 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 GPHA2Q96T91 129 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SPIN2AQ99865 258 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SPIN2BQ9BPZ2 258 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 RHBDL2Q9NX52 303 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 SIGLEC8Q9NYZ4 499 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 RYR2Q92736 4967 aa13.83□□□□□ -0.2
COL9A1-205ENST00000447041 TEX22C9J3V5 150 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 OR2J3O76001 311 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 SLC22A5O76082 557 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 KBTBD11O94819 623 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 BRWD1-AS2P59051 145 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 ATP5G2Q06055 141 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 LCN12Q6JVE5 192 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 OR4S2Q8NH73 311 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 SLC25A38Q96DW6 304 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 HSD17B10Q99714 261 aaKnown RBP13.82□□□□□ -0.2
COL9A1-205ENST00000447041 TAS2R8Q9NYW2 309 aa13.82□□□□□ -0.2
COL9A1-205ENST00000447041 CSMD3Q7Z407 3707 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.81□□□□□ -0.2
COL9A1-205ENST00000447041 E7EUB6 86 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 PTHLHP12272 177 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 C15orf32Q32M92 178 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 ADAMTSL5Q6ZMM2 481 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 PUSL1Q8N0Z8 303 aaKnown RBP13.81□□□□□ -0.2
COL9A1-205ENST00000447041 Q8N402 240 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 GVQW1Q8N7I0 195 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 PEMTQ9UBM1 199 aa13.81□□□□□ -0.2
COL9A1-205ENST00000447041 A0A1B0GW64 132 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 PPP5D1E7EU14 171 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 IL6RP08887 468 aaPredicted RBP13.8□□□□□ -0.2
COL9A1-205ENST00000447041 LYL1P12980 280 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 EDN2P20800 178 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 ZNF773Q6PK81 442 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 GTSCR1Q86UQ5 136 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 MFSD4AQ8N468 514 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 NECAP1Q8NC96 275 aa13.8□□□□□ -0.2
COL9A1-205ENST00000447041 VSTM2AQ8TAG5 236 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms