RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GNB1P62873 340 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 FAM53AQ6NSI3 398 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-209ENST00000439886 FAM58AQ8N1B3 248 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 TMEM147Q9BVK8 224 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 LIN7CQ9NUP9 197 aaKnown RBP9.89□□□□□ -0.83
SMPD4-209ENST00000439886 TMEM38BQ9NVV0 291 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 CRIM1Q9NZV1 1036 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
SMPD4-209ENST00000439886 LMO7DNF2Z398 122 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 SYNGR4O95473 234 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 NGFP01138 241 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 WIPI1Q5MNZ9 446 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 AMMECR1LQ6DCA0 310 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 RHBDD2Q6NTF9 364 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 H2BFWTQ7Z2G1 175 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 NINJ1Q92982 152 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 C19orf25Q9UFG5 118 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 FRYLO94915 3013 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 CACNA1EQ15878 2313 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 hCG_38984A0A1B0GV85 526 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 SCO2A0A1W2PP80 73 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 C17orf112F2Z3M2 114 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 IGKV1-39P01597 117 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 IGKV1D-39P04432 117 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 HLA-DRB5Q30154 266 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 UHRF2Q96PU4 802 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 TBL2Q9Y4P3 447 aaKnown RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 ZIC3O60481 467 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 RAMP3O60896 148 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 MMP23AO75900 390 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 GRPP07492 148 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 NPPCP23582 126 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 LGALS7P47929 136 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 HERV-K104P63124 156 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 CXorf67Q86X51 503 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-209ENST00000439886 ZNF439Q8NDP4 499 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 OR1L1Q8NH94 360 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 PYGO2Q9BRQ0 406 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 OR2D2Q9H210 308 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 DEPPQ9NTK1 212 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 PXMP4Q9Y6I8 212 aa9.88□□□□□ -0.83
SMPD4-209ENST00000439886 ABCA1O95477 2261 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 MUC22E2RYF6 1773 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-209ENST00000439886 ANKRD30BLA7E2S9 258 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 RBFOX2O43251 390 aaKnown RBP eCLIP9.87□□□□□ -0.831e-7■■■■■ 161.6
SMPD4-209ENST00000439886 PTGDSP41222 190 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 HIST3H3Q16695 136 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 NFAM1Q8NET5 270 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-209ENST00000439886 FAM222BQ8WU58 562 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 PILRBQ9UKJ0 227 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 MRPL33O75394 65 aaKnown RBP9.87□□□□□ -0.83
SMPD4-209ENST00000439886 COL8A2P25067 703 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 FGF12P61328 243 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 PCBD1P61457 104 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 PAX2Q02962 417 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 C10orf128Q5T292 105 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 OR5A2Q8NGI9 324 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 APOBEC3DQ96AK3 386 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-209ENST00000439886 POM121L2Q96KW2 1035 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 CLCF1Q9UBD9 225 aa9.87□□□□□ -0.83
SMPD4-209ENST00000439886 CPAMD8Q8IZJ3 1885 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 RHBDL1O75783 438 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 AZU1P20160 251 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 CRYGSP22914 178 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 GFRA1P56159 465 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 Q56UQ5 140 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 TPRX1Q8N7U7 411 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 ZIC4Q8N9L1 334 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 TMEM54Q969K7 222 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 NPCDR1Q9BY65 106 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 NBEAQ8NFP9 2946 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 ETV2O00321 342 aaPredicted RBP9.86□□□□□ -0.83
SMPD4-209ENST00000439886 IGLV3-1P01715 115 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 ARL14EPLP0DKL9 152 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 OTX1P32242 354 aaPredicted RBP9.86□□□□□ -0.83
SMPD4-209ENST00000439886 NTF4P34130 210 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 OR2Y1Q8NGV0 311 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 HIF1ANQ9NWT6 349 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 ELOVL5Q9NYP7 299 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 KCNIP1Q9NZI2 227 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 LCN2P80188 198 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 MIC13Q5XKP0 118 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 BOD1L2Q8IYS8 172 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 DRAM1Q8N682 238 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 KCNE4Q8WWG9 221 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 FBXL7Q9UJT9 491 aa9.86□□□□□ -0.83
SMPD4-209ENST00000439886 PRR14LQ5THK1 2151 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 GDF1P27539 372 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 PLP2Q04941 152 aa9.85□□□□□ -0.83
SMPD4-209ENST00000439886 OR4S2Q8NH73 311 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms