RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TRUB1Q8WWH5 349 aaKnown RBP8.87□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SPAG8Q99932 426 aaPredicted RBP8.87□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 METTL9Q9H1A3 318 aa8.87□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 VCX3BQ9H321 246 aa8.87□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 WARS2Q9UGM6 360 aaKnown RBP8.87□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 DEFB131BA0A096LNP1 70 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 CD74P04233 296 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 GNAO1P09471 354 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 C8orf88P0DMB2 117 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 ATP6V1E1P36543 226 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 MLANAQ16655 118 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 GAGE13Q4V321 117 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SLC25A30Q5SVS4 291 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 MEDAGQ5VYS4 303 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 CLEC19AQ6UXS0 136 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IZUMO2Q6UXV1 221 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 C19orf35Q6ZS72 473 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 PARP16Q8N5Y8 322 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 RHOXF1Q8NHV9 184 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 APH1BQ8WW43 257 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 RFKQ969G6 155 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 PELI1Q96FA3 418 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 NDUFAF3Q9BU61 184 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 AMBNQ9NP70 447 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IL36GQ9NZH8 169 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 KCNIP1Q9NZI2 227 aa8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 UBE2QL1A1L167 161 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 TSPAN4O14817 238 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 ARL3P36405 182 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SMN1Q16637 294 aaKnown RBP8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 FAM106AQ4KMX7 169 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 RAB12Q6IQ22 244 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 ZNF529Q6P280 563 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 C8orf59Q8N0T1 100 aaPredicted RBP8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 NECAP1Q8NC96 275 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SETD9Q8NE22 299 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 MRPL30Q8TCC3 161 aaKnown RBP8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 Q96MT0 163 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SULT4A1Q9BR01 284 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 EXOSC1Q9Y3B2 195 aaKnown RBP8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 RPL36Q9Y3U8 105 aaKnown RBP8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 PEX16Q9Y5Y5 336 aa8.85□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SNTNA6NMZ2 147 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 WBP4O75554 376 aaKnown RBP8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 CA1P00915 261 aaPredicted RBP8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IFNA21P01568 189 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IFNA17P01571 189 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 HTR1AP08908 422 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 RAB3AP20336 220 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 TMED1Q13445 227 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 TMEM187Q14656 261 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 Q5VSD8 79 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 IL1F10Q8WWZ1 152 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 GALMQ96C23 342 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 GPHA2Q96T91 129 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 C5orf66Q9H5L9 145 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
SMAD9-IT1-201ENST00000437983 SRRM4A7MD48 611 aaKnown RBP8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 MPPED1O15442 326 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 SC5DO75845 299 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 CCR9P51686 369 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 KRTAP10-2P60368 255 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 C12orf74Q32Q52 190 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 SLC22A6Q4U2R8 563 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 OR4A47Q6IF82 309 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 LGALS12Q96DT0 336 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 MRPL27Q9P0M9 148 aaKnown RBP8.83□□□□□ -1
SMAD9-IT1-201ENST00000437983 NACAE9PAV3 2078 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 IGHV3-35A0A0C4DH35 117 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 DAPL1A0PJW8 107 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 GTF2F2P13984 249 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 MAP2K4P45985 399 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 TNXAQ16473 311 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 LAIR2Q6ISS4 152 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 PDPNQ86YL7 162 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 OR13C5Q8NGS8 318 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 SRSF12Q8WXF0 261 aaKnown RBP8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 MARC2Q969Z3 335 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 CPNE2Q96FN4 548 aaPredicted RBP8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 C6orf62Q9GZU0 229 aaPredicted RBP8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 SPACA1Q9HBV2 294 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 STEAP1Q9UHE8 339 aa8.82□□□□□ -1
SMAD9-IT1-201ENST00000437983 HSPA13P48723 471 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 HMGN3Q15651 99 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 SIGIRRQ6IA17 410 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 IDO2Q6ZQW0 420 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 ZNF367Q7RTV3 350 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 ZNF554Q86TJ5 538 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 TTC9CQ8N5M4 171 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 OR52I1Q8NGK6 324 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 ISG20L2Q9H9L3 353 aaKnown RBP8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 SLC35D1Q9NTN3 355 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 MDFICQ9P1T7 246 aa8.81□□□□□ -1
SMAD9-IT1-201ENST00000437983 EXOGQ9Y2C4 368 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms