RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.437e-8■□□□□ 9
DDX56-205ENST00000433257 ZG16O60844 167 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 RBMXL2O75526 392 aaKnown RBP12.35□□□□□ -0.43
DDX56-205ENST00000433257 IL18BPO95998 194 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 HTD2P86397 168 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 TGFBR3Q03167 851 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 SRYQ05066 204 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 TFF3Q07654 80 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 SRSF6Q13247 344 aaKnown RBP12.35□□□□□ -0.43
DDX56-205ENST00000433257 FBXW9Q5XUX1 488 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 ELOVL5Q9NYP7 299 aa12.35□□□□□ -0.43
DDX56-205ENST00000433257 IGF2RP11717 2491 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 RTTNQ86VV8 2226 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 C9JCJ5 164 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 S1PR2O95136 353 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 HPRT1P00492 218 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 OR3A1P47881 315 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 GNB1P62873 340 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 CORO2AQ92828 525 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
DDX56-205ENST00000433257 RAB9BQ9NP90 201 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 KLF13Q9Y2Y9 288 aaPredicted RBP12.34□□□□□ -0.43
DDX56-205ENST00000433257 TPRP12270 2363 aaKnown RBP12.34□□□□□ -0.43
DDX56-205ENST00000433257 ACACBO00763 2458 aa12.34□□□□□ -0.43
DDX56-205ENST00000433257 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 C12orf77C9JDV5 145 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 K7ENP7 123 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 SPINT2O43291 252 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 NEURL1O76050 574 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 HBZP02008 142 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 MT-ND6P03923 174 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 CHRNA7P36544 502 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 PMP22Q01453 160 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 ZNF816Q0VGE8 651 aaPredicted RBP12.33□□□□□ -0.44
DDX56-205ENST00000433257 RAB31Q13636 194 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 TMEM183BQ1AE95 376 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 CST9LP1Q5W188 147 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 INO80CQ6PI98 192 aaPredicted RBP12.33□□□□□ -0.44
DDX56-205ENST00000433257 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 TTTY12Q9BZ98 90 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
DDX56-205ENST00000433257 CHD3Q12873 2000 aaKnown RBP12.33□□□□□ -0.44
DDX56-205ENST00000433257 FNDC10F2Z333 226 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 CDIPTO14735 213 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 NKX2-8O15522 239 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 SMPD2O60906 423 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 ERVK-16P61578 105 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 GAGE1Q13065 139 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 ZNF766Q5HY98 468 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 DCAF10Q5QP82 559 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 WDR73Q6P4I2 378 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 MDP1Q86V88 176 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 SFXN3Q9BWM7 321 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 C15orf62A8K5M9 175 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 ZNF705FA8MVS1 300 aaPredicted RBP12.32□□□□□ -0.44
DDX56-205ENST00000433257 KLRC4-KLRK1H3BQV0 150 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
DDX56-205ENST00000433257 RAMP3O60896 148 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 TNFSF13O75888 250 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 NDUFB4O95168 129 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 ZNF705DP0CH99 300 aaPredicted RBP12.32□□□□□ -0.44
DDX56-205ENST00000433257 ZNF705BP0CI00 300 aaPredicted RBP12.32□□□□□ -0.44
DDX56-205ENST00000433257 AREGP15514 252 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 WT1P19544 449 aaPredicted RBP12.32□□□□□ -0.44
DDX56-205ENST00000433257 TIMP3P35625 211 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 Q0VG73 95 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 C11orf52Q96A22 123 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 TMEM68Q96MH6 324 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 OR51B6Q9H340 312 aa12.32□□□□□ -0.44
DDX56-205ENST00000433257 TRGV8A0A0C4DH27 118 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 A0A1B0GWJ7 208 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 C17orf98A8MV24 154 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 LILRA1O75019 489 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
DDX56-205ENST00000433257 OR4A8P0C604 315 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 NPPCP23582 126 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 TDGF1P3P51864 188 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 RHOBP62745 196 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 RPL30P62888 115 aaKnown RBP12.31□□□□□ -0.44
DDX56-205ENST00000433257 RTL8BQ17RB0 113 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 SPINK14Q6IE38 97 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 WDR86Q86TI4 376 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
DDX56-205ENST00000433257 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 OR1L1Q8NH94 360 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 PPP1R35Q8TAP8 253 aa12.31□□□□□ -0.44
DDX56-205ENST00000433257 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms