RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 OR2B8PP59922 312 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 S100A10P60903 97 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 CXorf66Q5JRM2 361 aaPredicted RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 KLF17Q5JT82 389 aaPredicted RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 BRD3OSQ6XYD6 125 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 MOB3BQ86TA1 216 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 FAM71E2Q8N5Q1 922 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 TCTEX1D1Q8N7M0 179 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 OR4S2Q8NH73 311 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 RNASE11Q8TAA1 199 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 CFHR4Q92496 578 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 LSM10Q969L4 123 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 RPEQ96AT9 228 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 PPP1R14BQ96C90 147 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 RRNAD1Q96FB5 475 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 ADTRPQ96IZ2 230 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 RNF126Q9BV68 326 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 MAGT1Q9H0U3 335 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 C11orf1Q9H5F2 150 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 PLEKHA2Q9HB19 425 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 FAM212BQ9NTI7 297 aaPredicted RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 RCL1Q9Y2P8 373 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 PRELID3BQ9Y3B1 194 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 AMMECR1Q9Y4X0 333 aaPredicted RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 LSM5Q9Y4Y9 91 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 AUP1Q9Y679 476 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 OTOGQ6ZRI0 2925 aa7.15□□□□□ -1.27
SMC6-204ENST00000428868 FXYD6-FXYD2A0A087WZ82 144 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 LEUTXA8MZ59 168 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 H7C2Y5 167 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 HAX1O00165 279 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 NPFFO15130 113 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 TGFAP01135 160 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 IGLV2-23P01705 113 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 APOA2P02652 100 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 GAPDHP04406 335 aaKnown RBP7.14□□□□□ -1.27
SMC6-204ENST00000428868 CXCL2P19875 107 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 UBE2E1P51965 193 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 POLR2GP62487 172 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMC6-204ENST00000428868 KRTAP1-1Q07627 177 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 SSX2Q16385 188 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 TMEM177Q53S58 311 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 SPINK9Q5DT21 86 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 FAM120AOSQ5T036 256 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 OR4A47Q6IF82 309 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 C9orf62Q8N4C0 152 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 DMBX1Q8NFW5 382 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 OR1S1Q8NH92 325 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 FOXC2Q99958 501 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 C7orf69Q9H7B7 122 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 TMEM140Q9NV12 185 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 COMMD9Q9P000 198 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 DPM3Q9P2X0 92 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 WASHC3Q9Y3C0 194 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 MMP24Q9Y5R2 645 aa7.14□□□□□ -1.27
SMC6-204ENST00000428868 SETD2Q9BYW2 2564 aaPredicted RBP7.14□□□□□ -1.27
SMC6-204ENST00000428868 F8P00451 2351 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 IGHV1-69DA0A0B4J2H0 117 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 RNF222A6NCQ9 220 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 MSGN1A6NI15 193 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 SHOXO15266 292 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 VENTXO95231 258 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 TMEM50AO95807 157 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 IGHV1-69P01742 117 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
SMC6-204ENST00000428868 NQO2P16083 231 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 PSMB6P28072 239 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 RAB13P51153 203 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 RELBQ01201 579 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 SMCO1Q147U7 214 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 POU2AF1Q16633 256 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 RTL8BQ17RB0 113 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 MRGPRG-AS1Q2M3A8 158 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 LGALSLQ3ZCW2 172 aaPredicted RBP7.13□□□□□ -1.27
SMC6-204ENST00000428868 PDPNQ86YL7 162 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 CD300LFQ8TDQ1 290 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 BSCL2Q96G97 398 aaPredicted RBP7.13□□□□□ -1.27
SMC6-204ENST00000428868 HARBI1Q96MB7 349 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
SMC6-204ENST00000428868 ITGB1BP2Q9UKP3 347 aa7.13□□□□□ -1.27
SMC6-204ENST00000428868 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
SMC6-204ENST00000428868 A0A0U1RQK1 487 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 A0A1B0GU03 582 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 MDFIC2A0A1B0GVS7 189 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 ARPC5O15511 151 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 ST8SIA3O43173 380 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 SSSCA1O60232 199 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 DEDDO75618 318 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 IL6RP08887 468 aaPredicted RBP7.12□□□□□ -1.27
SMC6-204ENST00000428868 IAPPP10997 89 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 SLC25A4P12235 298 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 SLC25A6P12236 298 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 LYL1P12980 280 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 NKX2-1P43699 371 aaPredicted RBP7.12□□□□□ -1.27
SMC6-204ENST00000428868 PAX9P55771 341 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 LGALS4P56470 323 aa7.12□□□□□ -1.27
SMC6-204ENST00000428868 RPS16P62249 146 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms