RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SLC6A1P30531 599 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 KIR2DS2P43631 304 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 SSBP2P81877 361 aaPredicted RBP14.08□□□□□ -0.16
HERC3-205ENST00000426683 MRGPRG-AS1Q2M3A8 158 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 ACTBL2Q562R1 376 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 VAX1Q5SQQ9 334 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 MCFD2Q8NI22 146 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 FCAMRQ8WWV6 532 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 KLK15Q9H2R5 256 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 FOXA2Q9Y261 457 aaPredicted RBP14.08□□□□□ -0.16
HERC3-205ENST00000426683 NBEAL1Q6ZS30 2694 aa14.08□□□□□ -0.16
HERC3-205ENST00000426683 GABARAPH6UMI1 98 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 M0QYG6 137 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 SOX15O60248 233 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 CDX1P47902 265 aaPredicted RBP14.07□□□□□ -0.16
HERC3-205ENST00000426683 MRPS10P82664 201 aaKnown RBP14.07□□□□□ -0.16
HERC3-205ENST00000426683 DGCR2P98153 550 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 IL18Q14116 193 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 PRSS8Q16651 343 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 AKIRIN2Q53H80 203 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 AADACL3Q5VUY0 350 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 PYHIN1Q6K0P9 492 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 ETV3LQ6ZN32 361 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 VKORC1L1Q8N0U8 176 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 SPAG16Q8N0X2 631 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 OR51H1Q8NH63 302 aa14.07□□□□□ -0.16
HERC3-205ENST00000426683 NXF2Q9GZY0 626 aaKnown RBP14.07□□□□□ -0.16
HERC3-205ENST00000426683 VWFP04275 2813 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 RAMP3O60896 148 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 CD3DP04234 171 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 CD33P20138 364 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 RAB9AP51151 201 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 TNXAQ16473 311 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 RNASE10Q5GAN6 216 aaKnown RBP14.06□□□□□ -0.16
HERC3-205ENST00000426683 C1QL4Q86Z23 238 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 OR5M8Q8NGP6 311 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 MYOZ3Q8TDC0 251 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 CASTOR1Q8WTX7 329 aa14.06□□□□□ -0.16
HERC3-205ENST00000426683 TINAGL1Q9GZM7 467 aaPredicted RBP14.06□□□□□ -0.16
HERC3-205ENST00000426683 GPR31O00270 319 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 CREBL2O60519 120 aaPredicted RBP14.05□□□□□ -0.16
HERC3-205ENST00000426683 PGLYRP1O75594 196 aaPredicted RBP14.05□□□□□ -0.16
HERC3-205ENST00000426683 HRASP01112 189 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 RLN1P04808 185 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 IFNA6P05013 189 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 MYCNOSP40205 109 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 KIAA0141Q14154 515 aaPredicted RBP14.05□□□□□ -0.16
HERC3-205ENST00000426683 CMTM1Q8IZ96 169 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 ZNF491Q8N8L2 437 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 POC5Q8NA72 575 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 TMEM229BQ8NBD8 167 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 WFDC9Q8NEX5 89 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 DUX3Q96PT4 197 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 ZNF430Q9H8G1 570 aaPredicted RBP14.05□□□□□ -0.16
HERC3-205ENST00000426683 RABL2AQ9UBK7 228 aaPredicted RBP14.05□□□□□ -0.16
HERC3-205ENST00000426683 RABL2BQ9UNT1 228 aa14.05□□□□□ -0.16
HERC3-205ENST00000426683 G3V4G9 280 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 ZNF701M0R085 212 aaPredicted RBP14.04□□□□□ -0.16
HERC3-205ENST00000426683 CTDSPLO15194 276 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 RBFOX2O43251 390 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERC3-205ENST00000426683 OR2A4O95047 310 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 TBPP20226 339 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 TNFSF8P32971 234 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 TAS2R19P59542 299 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 DEFB136Q30KP8 78 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 LPCAT3Q6P1A2 487 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 SSX9Q7RTT3 188 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 MRPL41Q8IXM3 137 aaKnown RBP14.04□□□□□ -0.16
HERC3-205ENST00000426683 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 PUSL1Q8N0Z8 303 aaKnown RBP14.04□□□□□ -0.16
HERC3-205ENST00000426683 LINC00482Q8N8I6 264 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 VSTM2AQ8TAG5 236 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 SMIM4Q8WVI0 70 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 C4orf3Q8WVX3 66 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 RHOVQ96L33 236 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 UBE2E2Q96LR5 201 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 OR2A7Q96R45 310 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 PHB2Q99623 299 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 GNB4Q9HAV0 340 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 VSIG4Q9Y279 399 aa14.04□□□□□ -0.16
HERC3-205ENST00000426683 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 CCL24O00175 119 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 ACTL6BO94805 426 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 KBTBD11O94819 623 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 HPRT1P00492 218 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 CD40LGP29965 261 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 SSBP1Q04837 148 aaKnown RBP14.03□□□□□ -0.16
HERC3-205ENST00000426683 PHLDA2Q53GA4 152 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 SAMD5Q5TGI4 173 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 ASPHD1Q5U4P2 390 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 ARRDC1Q8N5I2 433 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 OR5T1Q8NG75 326 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 CD300LFQ8TDQ1 290 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
HERC3-205ENST00000426683 RAX2Q96IS3 184 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 TMEM68Q96MH6 324 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 MS4A10Q96PG2 267 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 P2RX4Q99571 388 aa14.03□□□□□ -0.16
HERC3-205ENST00000426683 RSRP1Q9BUV0 290 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms