RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FLYWCH2Q96CP2 140 aaKnown RBP13.99□□□□□ -0.17
VCP-202ENST00000417448 RAX2Q96IS3 184 aa13.99□□□□□ -0.17
VCP-202ENST00000417448 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
VCP-202ENST00000417448 SORL1Q92673 2214 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 RRHO14718 337 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 SLC25A17O43808 307 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 CRYZL1O95825 349 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 IGLV2-23P01705 113 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 IGHG2P01859 326 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 GNRHRP30968 328 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 RAB25P57735 213 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 BRWD1-AS2P59051 145 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 PLGLAQ15195 96 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 KCTD9Q7L273 389 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 PDPNQ86YL7 162 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 MFSD4AQ8N468 514 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 OR8H1Q8NGG4 311 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 MOB3AQ96BX8 217 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
VCP-202ENST00000417448 METTL1Q9UBP6 276 aaKnown RBP13.98□□□□□ -0.17
VCP-202ENST00000417448 SHOXO15266 292 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 NDUFA3O95167 84 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 S100A5P33763 92 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 TAGLNQ01995 201 aaKnown RBP13.97□□□□□ -0.17
VCP-202ENST00000417448 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 PYDC2Q56P42 97 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 LIN54Q6MZP7 749 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 C15orf40Q8WUR7 153 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 HARBI1Q96MB7 349 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 WSB1Q9Y6I7 421 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 V9GYH0 126 aa13.97□□□□□ -0.17
VCP-202ENST00000417448 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 SLC22A5O76082 557 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 TPPPO94811 219 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 SLC6A1P30531 599 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 NDPQ00604 133 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 RTL8BQ17RB0 113 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 PHLDA2Q53GA4 152 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 RNASE10Q5GAN6 216 aaKnown RBP13.96□□□□□ -0.17
VCP-202ENST00000417448 IDO2Q6ZQW0 420 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 LCNL1Q6ZST4 164 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 CCDC190Q86UF4 302 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 VKORC1L1Q8N0U8 176 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 TMEM229BQ8NBD8 167 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 OR6Q1Q8NGQ2 317 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 OR51H1Q8NH63 302 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 ADTRPQ96IZ2 230 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 CITED4Q96RK1 184 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 PARP11Q9NR21 331 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 ZNF256Q9Y2P7 627 aaPredicted RBP13.96□□□□□ -0.17
VCP-202ENST00000417448 FBXO7Q9Y3I1 522 aa13.96□□□□□ -0.17
VCP-202ENST00000417448 A6NHS1 94 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 G3V318 75 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 CCL24O00175 119 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 CTDSPLO15194 276 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 RAB3DO95716 219 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 IFNA6P05013 189 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 PI3P19957 117 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 ZNF79Q15937 498 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 DEFB136Q30KP8 78 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 TMEM177Q53S58 311 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 C9orf66Q5T8R8 295 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 AADACL3Q5VUY0 350 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 STEAP1BQ6NZ63 245 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 TSNAXQ99598 290 aaKnown RBP13.95□□□□□ -0.18
VCP-202ENST00000417448 FAM103A1Q9BTL3 118 aaKnown RBP13.95□□□□□ -0.18
VCP-202ENST00000417448 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 SMAD5-AS1Q9Y6J3 95 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 A3GALT2U3KPV4 340 aa13.95□□□□□ -0.18
VCP-202ENST00000417448 ATP6V0E1O15342 81 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 GSTZ1O43708 216 aaPredicted RBP13.94□□□□□ -0.18
VCP-202ENST00000417448 CA2P00918 260 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 RLN1P04808 185 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 PPP5CP53041 499 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 TAS2R19P59542 299 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 GNB1P62873 340 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 CX3CL1P78423 397 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 SCGB2B2Q4G0G5 96 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 STPG2Q8N412 459 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 HSD17B10Q99714 261 aaKnown RBP13.94□□□□□ -0.18
VCP-202ENST00000417448 THAP7Q9BT49 309 aaPredicted RBP13.94□□□□□ -0.18
VCP-202ENST00000417448 PRELID3BQ9Y3B1 194 aa13.94□□□□□ -0.18
VCP-202ENST00000417448 PLECQ15149 4684 aaKnown RBP13.93□□□□□ -0.18
VCP-202ENST00000417448 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
VCP-202ENST00000417448 HLA-DRB1P01911 266 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 CD74P04233 296 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 CRYGBP07316 175 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 RRASP10301 218 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 RPA2P15927 270 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 MRPS10P82664 201 aaKnown RBP13.93□□□□□ -0.18
VCP-202ENST00000417448 CBX3Q13185 183 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 ACTBL2Q562R1 376 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 ZNF66Q6ZN08 573 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 SSX9Q7RTT3 188 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms