RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 IL34Q6ZMJ4 242 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 OVCH2Q7RTZ1 564 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 HOGA1Q86XE5 327 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 MFSD4AQ8N468 514 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 GVQW1Q8N7I0 195 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
CPNE1-210ENST00000416778 DCUN1D5Q9BTE7 237 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 ELOVL1Q9BW60 279 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 PRELID3BQ9Y3B1 194 aa13.69□□□□□ -0.22
CPNE1-210ENST00000416778 KMT2CQ8NEZ4 4911 aaKnown RBP13.68□□□□□ -0.22
CPNE1-210ENST00000416778 A0A0A6YYH2 397 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 A6NJ64 397 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-210ENST00000416778 PTHLHP12272 177 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 CDK10Q15131 360 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 BEST4Q8NFU0 473 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 PHB2Q99623 299 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 HSD17B10Q99714 261 aaKnown RBP13.68□□□□□ -0.22
CPNE1-210ENST00000416778 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 PEF1Q9UBV8 284 aaKnown RBP13.68□□□□□ -0.22
CPNE1-210ENST00000416778 SPATA2Q9UM82 520 aa13.68□□□□□ -0.22
CPNE1-210ENST00000416778 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 DEFA5Q01523 94 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 KCTD9Q7L273 389 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 TTC9CQ8N5M4 171 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
CPNE1-210ENST00000416778 HUWE1Q7Z6Z7 4374 aaKnown RBP13.67□□□□□ -0.22
CPNE1-210ENST00000416778 TRBV9A0A0B4J1U6 114 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 TMEM127O75204 238 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 TRBV12-3P01733 135 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 FCGR2CP31995 323 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 ZNF45Q02386 682 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 OR2B11Q5JQS5 317 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 ZNF66Q6ZN08 573 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 SBSPONQ8IVN8 264 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 MMD2Q8IY49 270 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 Q8N1Y9 231 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 ACOT12Q8WYK0 555 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 GPHA2Q96T91 129 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 CCL28Q9NRJ3 127 aa13.66□□□□□ -0.22
CPNE1-210ENST00000416778 TRIM64CA6NLI5 447 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 E7EUB6 86 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 OR2A4O95047 310 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 PRH1P02810 166 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 TGFBR1P36897 503 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
CPNE1-210ENST00000416778 MSMO1Q15800 293 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 HAPLN4Q86UW8 402 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 PUSL1Q8N0Z8 303 aaKnown RBP13.65□□□□□ -0.22
CPNE1-210ENST00000416778 YIPF6Q96EC8 236 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 OR2A7Q96R45 310 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 AKIP1Q9NQ31 210 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
CPNE1-210ENST00000416778 MRPS7Q9Y2R9 242 aaKnown RBP13.65□□□□□ -0.22
CPNE1-210ENST00000416778 XRCC3O43542 346 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 ACTL6BO94805 426 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-210ENST00000416778 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 ARPC4P59998 168 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 RHOGP84095 191 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 ANKRD13BQ86YJ7 626 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 TMEM167AQ8TBQ9 72 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 TCTEX1D2Q8WW35 142 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 GIMAP1Q8WWP7 306 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 TAS2R8Q9NYW2 309 aa13.64□□□□□ -0.23
CPNE1-210ENST00000416778 MPPED1O15442 326 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 CREBL2O60519 120 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-210ENST00000416778 CSN3P07498 182 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 MECP2P51608 486 aaKnown RBP13.63□□□□□ -0.23
CPNE1-210ENST00000416778 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 TATDN3Q17R31 274 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 CROCCP3Q8IVE0 287 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 ZBTB34Q8NCN2 500 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 SNAPC3Q92966 411 aa13.63□□□□□ -0.23
CPNE1-210ENST00000416778 S100A16Q96FQ6 103 aaKnown RBP13.63□□□□□ -0.23
CPNE1-210ENST00000416778 A0A1B0GW64 132 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 HMX3A6NHT5 357 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 TEX22C9J3V5 150 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 AIREO43918 545 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 KBTBD11O94819 623 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 PPYP01298 95 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 FCER2P06734 321 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 FRMD6-AS1P0C7T7 363 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 TIMM50Q3ZCQ8 353 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 DHRS11Q6UWP2 260 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 NECAP1Q8NC96 275 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 TSPAN14Q8NG11 270 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 OR5AP2Q8NGF4 316 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms