RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CENPOQ9BU64 300 aa11.87□□□□□ -0.51
ACTB-202ENST00000414620 RBMX2Q9Y388 322 aaKnown RBP11.87□□□□□ -0.51
ACTB-202ENST00000414620 SSX5O60225 188 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 ACTL6BO94805 426 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 HLA-DQB1P01920 261 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 CD36P16671 472 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 SDC2P34741 201 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 RHOGP84095 191 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 ZNF45Q02386 682 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 EXOSC2Q13868 293 aaKnown RBP11.86□□□□□ -0.51
ACTB-202ENST00000414620 CDK10Q15131 360 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 RPEL1Q2QD12 228 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 CNIH2Q6PI25 160 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 TPRA1Q86W33 373 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 Q8N1Y9 231 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 OR5H6Q8NGV6 325 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 TCTEX1D2Q8WW35 142 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 USMG5Q96IX5 58 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 AKIP1Q9NQ31 210 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 RHBDL2Q9NX52 303 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 SPATA2Q9UM82 520 aa11.86□□□□□ -0.51
ACTB-202ENST00000414620 MRPS7Q9Y2R9 242 aaKnown RBP11.86□□□□□ -0.51
ACTB-202ENST00000414620 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 HMX3A6NHT5 357 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 C3orf84H3BNL1 204 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 BRI3O95415 125 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 FCER2P06734 321 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 CTXN2P0C2S0 81 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 PTHLHP12272 177 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 IL34Q6ZMJ4 242 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 MMD2Q8IY49 270 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 DCSTAMPQ9H295 470 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 Q9H521 79 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 TAS2R8Q9NYW2 309 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 ANXA10Q9UJ72 324 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 PRELID3BQ9Y3B1 194 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 RYR3Q15413 4870 aa11.85□□□□□ -0.51
ACTB-202ENST00000414620 CREBL2O60519 120 aaPredicted RBP11.84□□□□□ -0.51
ACTB-202ENST00000414620 OR2J3O76001 311 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 SCGNO76038 276 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 CSN3P07498 182 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 ZNF773Q6PK81 442 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 MUC7Q8TAX7 377 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
ACTB-202ENST00000414620 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 BMPR1BO00238 502 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 TNFSF12O43508 249 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 ARPC4P59998 168 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 NEDD8Q15843 81 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 TATDN3Q17R31 274 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 FYTTD1Q96QD9 318 aaKnown RBP11.83□□□□□ -0.52
ACTB-202ENST00000414620 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
ACTB-202ENST00000414620 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 H0Y980 276 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 SLC22A5O76082 557 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 KBTBD11O94819 623 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 MYOD1P15172 320 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
ACTB-202ENST00000414620 MFSD4AQ8N468 514 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 TTC9CQ8N5M4 171 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 SECTM1Q8WVN6 248 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 HSD17B10Q99714 261 aaKnown RBP11.82□□□□□ -0.52
ACTB-202ENST00000414620 TM2D3Q9BRN9 247 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 YTHDF1Q9BYJ9 559 aaKnown RBP11.82□□□□□ -0.52
ACTB-202ENST00000414620 CCL28Q9NRJ3 127 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 S4R3C0 116 aa11.82□□□□□ -0.52
ACTB-202ENST00000414620 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 TEX22C9J3V5 150 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 E7EUB6 86 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 OR2A4O95047 310 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 EDN2P20800 178 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 FCGR2CP31995 323 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
ACTB-202ENST00000414620 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 C15orf32Q32M92 178 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 CASC10Q5T4H9 136 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 BEST4Q8NFU0 473 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 OR13F1Q8NGS4 319 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 OR2A7Q96R45 310 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 PEMTQ9UBM1 199 aa11.81□□□□□ -0.52
ACTB-202ENST00000414620 ETV7Q9Y603 341 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms