RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CBX3Q13185 183 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TRAM1Q15629 374 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 RPEL1Q2QD12 228 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TMEM177Q53S58 311 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 ZNF343Q6P1L6 599 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 IDO2Q6ZQW0 420 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 OR10J5Q8NHC4 309 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 RAB3CQ96E17 227 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TMEM68Q96MH6 324 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 SPATA25Q9BR10 227 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 THAP7Q9BT49 309 aaPredicted RBP7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 CABLES2Q9BTV7 478 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TUBA4BQ9H853 241 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 NKX1-2Q9UD57 310 aaPredicted RBP7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 RAB22AQ9UL26 194 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TPRKBQ9Y3C4 175 aa7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 RBM7Q9Y580 266 aaKnown RBP7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
NIFKP1-201ENST00000398317 TRBV6-7A0A0A0MS04 114 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 A0A0B4J203 849 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 J3QRK9 145 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 RGS10O43665 173 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 CRYZL1O95825 349 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 AADACP22760 399 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 OR10A3P58181 314 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 MLLT11Q13015 90 aaPredicted RBP7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 TNXAQ16473 311 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 PRSS8Q16651 343 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 TATDN3Q17R31 274 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 RTL8BQ17RB0 113 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 GTSCR1Q86UQ5 136 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 ADAD2Q8NCV1 583 aaKnown RBP7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 OR10R2Q8NGX6 335 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 USMG5Q96IX5 58 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 GINS4Q9BRT9 223 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 DUSP21Q9H596 190 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 RETNQ9HD89 108 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
NIFKP1-201ENST00000398317 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 IGKV1D-8A0A087WSZ0 117 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 LINC00473A8K010 186 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 BMPR1BO00238 502 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 MPPED1O15442 326 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 BRI3O95415 125 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 OR9G9P0C7N8 305 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 RRASP10301 218 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 PSMA1P25786 263 aaKnown RBP7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 DUTP33316 252 aaKnown RBP7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 UBE2KP61086 200 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 RHOGP84095 191 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 VMA21Q3ZAQ7 101 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 LCN12Q6JVE5 192 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 TEX45Q8NA69 505 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 NRG4Q8WWG1 115 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 ACOT12Q8WYK0 555 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 DDB2Q92466 427 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 SNAPC3Q92966 411 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 MGLLQ99685 303 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 PLEKHA3Q9HB20 300 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 AKIP1Q9NQ31 210 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 ELF5Q9UKW6 265 aaPredicted RBP7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 X6R8D5 127 aa7.43□□□□□ -1.22
NIFKP1-201ENST00000398317 RAB27BO00194 218 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 MFNGO00587 321 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 IFNA6P05013 189 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 HIST1H1DP16402 221 aaKnown RBP7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 HOXA5P20719 270 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 GADD45AP24522 165 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 TALDO1P37837 337 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 RANBP1P43487 201 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 MECP2P51608 486 aaKnown RBP7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 PSMD7P51665 324 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ZNF45Q02386 682 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ARFRP1Q13795 201 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 EXOSC2Q13868 293 aaKnown RBP7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 SSX1Q16384 188 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 PRSS48Q7RTY5 328 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 H1FOOQ8IZA3 346 aaPredicted RBP7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 Q8N402 240 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ADTRPQ96IZ2 230 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 FAM110AQ9BQ89 295 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ACOT13Q9NPJ3 140 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 SIGLEC8Q9NYZ4 499 aa7.42□□□□□ -1.22
NIFKP1-201ENST00000398317 ALMS1Q8TCU4 4167 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 SMIM30A4D0T7 59 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 IFITM5A6NNB3 132 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 PPP5D1E7EU14 171 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 PDCD5O14737 125 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 FCGR3BO75015 233 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 OR2J3O76001 311 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 OR2A4O95047 310 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 DIRAS3O95661 229 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 SAA1P0DJI8 122 aaPredicted RBP7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 EDN2P20800 178 aa7.41□□□□□ -1.22
NIFKP1-201ENST00000398317 CRHBPP24387 322 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms