RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MANBALQ9NQG1 85 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 M0R1X1 148 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 NQO2P16083 231 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 PSMB3P49720 205 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 RPRMLQ8N4K4 120 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 DDB2Q92466 427 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 C14orf144Q96I85 54 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 WDR83OSQ9Y284 106 aa12.38□□□□□ -0.43
SCFD2-201ENST00000388940 CYB5BO43169 146 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 SPRY3O43610 288 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 C17orf58Q2M2W7 97 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 PRAMEF5Q5TYX0 476 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 DMRTC2Q8IXT2 367 aaPredicted RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 OR4A16Q8NH70 328 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 Q8TCH9 128 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 SDSLQ96GA7 329 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 S1PR3Q99500 378 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 NEU1Q99519 415 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 SLC25A22Q9H936 323 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 NAT8Q9UHE5 227 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 TGIF2-C20orf24A0A0A6YYL0 155 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 TGOLN2O43493 480 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 EDDM3BP56851 147 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 ERVK-16P61578 105 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
SCFD2-201ENST00000388940 KRTCAP3Q53RY4 240 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 SPINK9Q5DT21 86 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 FAM180AQ6UWF9 173 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 REC114Q7Z4M0 266 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 Q8N7P7 452 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 RAB24Q969Q5 203 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 SSX3Q99909 188 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 RNF7Q9UBF6 113 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
SCFD2-201ENST00000388940 DSCAMO60469 2012 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 TANC2Q9HCD6 1990 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 MPDU1O75352 247 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 KBTBD11O94819 623 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 IFNA10P01566 189 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 CD1BP29016 333 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 SELENOVP59797 346 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 RELBQ01201 579 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 ZNF674Q2M3X9 581 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 RPL39P5Q59GN2 51 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 SVILO95425 2214 aa12.36□□□□□ -0.43
SCFD2-201ENST00000388940 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 HOXA5P20719 270 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 TMPRSS3P57727 454 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 TMEM241Q24JQ0 296 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 PLPPR2Q96GM1 343 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 KBTBD11-OT1A0A1B0GTJ5 212 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 OPN1MWP04001 364 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 OPN1MW2P0DN77 364 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 OPN1MW3P0DN78 364 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
SCFD2-201ENST00000388940 HNF4GQ14541 408 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 STUMQ69YW2 141 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 RAB1CQ92928 201 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 GCM1Q9NP62 436 aa12.35□□□□□ -0.43
SCFD2-201ENST00000388940 EP300Q09472 2414 aaPredicted RBP12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TRBV24-1A0A075B6N3 115 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TRGV8A0A0C4DH27 118 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 SMCO3A2RU48 225 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 A8MXE2 369 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 PRSS46E5RG02 174 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TLE1Q04724 770 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 C2orf88Q9BSF0 95 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 PRRC2CQ9Y520 2896 aaKnown RBP12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TET2Q6N021 2002 aaPredicted RBP12.34□□□□□ -0.43
SCFD2-201ENST00000388940 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 NDUFB7P17568 137 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 DNLZQ5SXM8 178 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
SCFD2-201ENST00000388940 TRGV10A0A0A0MS01 117 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 TM4SF5O14894 197 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms