RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CXCL2P19875 107 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ZNF385AQ96PM9 386 aaKnown RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 MEGF9Q9H1U4 602 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TMEM30AQ9NV96 361 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TRAV8-4A0A0B4J246 113 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB8E9PQR5 432 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB9F8W1W9 429 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 PEX7O00628 323 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB7O75200 414 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ZNF345Q14585 488 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CENPWQ5EE01 88 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 GFI1BQ5VTD9 330 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 LINC00305Q7Z4B0 112 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ABHD12Q8N2K0 398 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 SDHCQ99643 169 aaPredicted RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 SEMA5BQ9P283 1151 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 C21orf140B9A014 251 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 ZNF48Q96MX3 618 aaPredicted RBP5.05□□□□□ -1.6
RFX3-204ENST00000382004 C4AP0C0L4 1744 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 C4BP0C0L5 1744 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CEACAM21Q3KPI0 293 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 DCAF12L2Q5VW00 463 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 LHX8Q68G74 356 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 FGFRL1Q8N441 504 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 CLDND2Q8NHS1 167 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 WDR34Q96EX3 536 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 TTTY12Q9BZ98 90 aa5.05□□□□□ -1.6
RFX3-204ENST00000382004 DOT1LQ8TEK3 1739 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 IGHV5-10-1A0A0J9YXX1 117 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 UPK3AO75631 287 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 EGR1P18146 543 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 COL9A1P20849 921 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 TSPAN7P41732 249 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 RIPPLY3P57055 190 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 FGF12P61328 243 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 HIST1H4AP62805 103 aaKnown RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 CACNA1SQ13698 1873 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 ACSF3Q4G176 576 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 ZNF562Q6V9R5 426 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 NRTNQ99748 197 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 ECM29Q5VYK3 1845 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 ZG16O60844 167 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 ATP5LO75964 103 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 LIPFP07098 398 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 TMEM42Q69YG0 159 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 TMEM174Q8WUU8 243 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 COL16A1Q07092 1604 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 TRIP12Q14669 1992 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 A0A0U1RRA0 63 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 KLF4O43474 513 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 GHRHP01286 108 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 OR4D11Q8NGI4 311 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 TMEM74BQ9NUR3 256 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 CHD5Q8TDI0 1954 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 A0A1W2PQD3 144 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB11E5RHQ5 1161 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 TFF2Q03403 129 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 GPR146Q96CH1 333 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 VCX2Q9H322 139 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 FNDC4Q9H6D8 234 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 MBD1Q9UIS9 605 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 TRBV9A0A0B4J1U6 114 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 MSRB3Q8IXL7 192 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 NPIPB3Q92617 1050 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 REPIN1Q9BWE0 567 aaKnown RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 DDX60Q8IY21 1712 aaKnown RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 TRAV2A0A0B4J234 112 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 PGLYRP1O75594 196 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 SSBP4Q9BWG4 385 aaPredicted RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
RFX3-204ENST00000382004 LRRC37A3O60309 1634 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 FAM209AQ5JX71 171 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 VN1R4Q7Z5H5 301 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 GLMPQ8WWB7 406 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 SLC25A2Q9BXI2 301 aa5.04□□□□□ -1.6
RFX3-204ENST00000382004 LRP6O75581 1613 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 GCM2O75603 506 aaPredicted RBP5.03□□□□□ -1.6
RFX3-204ENST00000382004 PSG4Q00888 419 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 PNKDQ8N490 385 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 SCN9AQ15858 1988 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 GGTLC3B5MD39 225 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 BGLAPP02818 100 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 TNFRSF9Q07011 255 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 DNM1P46Q6ZS02 220 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 SELENOHQ8IZQ5 122 aaKnown RBP5.03□□□□□ -1.6
RFX3-204ENST00000382004 PUSL1Q8N0Z8 303 aaKnown RBP5.03□□□□□ -1.6
RFX3-204ENST00000382004 TXNDC17Q9BRA2 123 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 TMEM222Q9H0R3 208 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 RALGAPA1Q6GYQ0 2036 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 CD8AP01732 235 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 CRPP02741 224 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 NOVP48745 357 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 HMGA2P52926 109 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 NABP2Q9BQ15 211 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 CST9LQ9H4G1 147 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 WDR54Q9H977 334 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 IL11P20809 199 aa5.03□□□□□ -1.6
RFX3-204ENST00000382004 PDLIM4P50479 330 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms