RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NOTOA8MTQ0 251 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 ACTL6BO94805 426 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 FGF9P31371 208 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-202ENST00000381208 DUTP33316 252 aaKnown RBP9.97□□□□□ -0.81
RPAIN-202ENST00000381208 PLA2G7Q13093 441 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 GPR107Q5VW38 600 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 C22orf42Q6IC83 251 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 TPRA1Q86W33 373 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 SGPP2Q8IWX5 399 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 PHB2Q99623 299 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 ATG5Q9H1Y0 275 aa9.97□□□□□ -0.81
RPAIN-202ENST00000381208 ZNF230Q9UIE0 474 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-202ENST00000381208 MRPS7Q9Y2R9 242 aaKnown RBP9.97□□□□□ -0.81
RPAIN-202ENST00000381208 A0A0B4J203 849 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SHISA3A0PJX4 238 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 A8MZ25 164 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 FRMD6-AS1P0C7T7 363 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 CD36P16671 472 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SSBP2P81877 361 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-202ENST00000381208 PJVKQ0ZLH3 352 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 KLF5Q13887 457 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-202ENST00000381208 PRSS8Q16651 343 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 HACD4Q5VWC8 232 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 ZNF343Q6P1L6 599 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SLC25A42Q86VD7 318 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 ZNF645Q8N7E2 425 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 OR9G4Q8NGQ1 327 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 DDB2Q92466 427 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SPIN2AQ99865 258 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SPIN2BQ9BPZ2 258 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 RSRP1Q9BUV0 290 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 COA4Q9NYJ1 87 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 SIGLEC8Q9NYZ4 499 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
RPAIN-202ENST00000381208 OR2W1Q9Y3N9 320 aa9.96□□□□□ -0.82
RPAIN-202ENST00000381208 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
RPAIN-202ENST00000381208 H3BMQ9 156 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 MPPED1O15442 326 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 CRYZL1O95825 349 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 OR9G9P0C7N8 305 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 CDNFQ49AH0 187 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 FAM223AQ8IWN6 122 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 VSTM2AQ8TAG5 236 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 SNAPC3Q92966 411 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 TNCP24821 2201 aa9.95□□□□□ -0.82
RPAIN-202ENST00000381208 ANKRD34BA5PLL1 514 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 MSGN1A6NI15 193 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 AIREO43918 545 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 OR2A4O95047 310 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 HLA-DQB1P01920 261 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 SCAND1P57086 179 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 CDK10Q15131 360 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 TNXAQ16473 311 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 CNIH2Q6PI25 160 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
RPAIN-202ENST00000381208 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 SRSF12Q8WXF0 261 aaKnown RBP9.94□□□□□ -0.82
RPAIN-202ENST00000381208 MAFIPQ8WZ33 124 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 DCUN1D5Q9BTE7 237 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 ST6GALNAC5Q9BVH7 336 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 PEMTQ9UBM1 199 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 SSR3Q9UNL2 185 aa9.94□□□□□ -0.82
RPAIN-202ENST00000381208 LINC00473A8K010 186 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 TMEM127O75204 238 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 TUSC2O75896 110 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 GNG2P59768 71 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 DYRK1AQ13627 763 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 LCN12Q6JVE5 192 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 KCTD9Q7L273 389 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 OVCH2Q7RTZ1 564 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 Q8N402 240 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 OR2K2Q8NGT1 345 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 ACOT12Q8WYK0 555 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
RPAIN-202ENST00000381208 FUNDC2Q9BWH2 189 aa9.93□□□□□ -0.82
RPAIN-202ENST00000381208 TXNL4BQ9NX01 149 aaKnown RBP9.93□□□□□ -0.82
RPAIN-202ENST00000381208 RBMX2Q9Y388 322 aaKnown RBP9.93□□□□□ -0.82
RPAIN-202ENST00000381208 GABARAPO95166 117 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 SAA1P0DJI8 122 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-202ENST00000381208 IGHV4-30-4P0DP06 118 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 SYNJ2BPP57105 145 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 MSMO1Q15800 293 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 GTSCR1Q86UQ5 136 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 NR2C2APQ86WQ0 139 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 OR4S2Q8NH73 311 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 AIFM2Q9BRQ8 373 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
RPAIN-202ENST00000381208 IGKV1D-8A0A087WSZ0 117 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 A0A0A6YYH2 397 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 TRBV9A0A0B4J1U6 114 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms