RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 F2RL1P55085 397 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 UCP3P55916 312 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 BRWD1-AS2P59051 145 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 C9orf66Q5T8R8 295 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 ZNF66Q6ZN08 573 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 ZNF695Q8IW36 515 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 C5orf56Q8N8D9 126 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 BVESQ8NE79 360 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 OR13C8Q8NGS7 320 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 TERB2Q8NHR7 220 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 ADTRPQ96IZ2 230 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 HRASLSQ9HDD0 168 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 WASHC3Q9Y3C0 194 aa9.52□□□□□ -0.89
LSM2-208ENST00000375661 H7C2Y5 167 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 CCL24O00175 119 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 TNFSF12O43508 249 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 IGHG2P01859 326 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 IGKV1-16P04430 117 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 IL7P13232 177 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 SCGB2B2Q4G0G5 96 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 TRIQKQ629K1 86 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 C18orf65Q6ZTR6 163 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 FOXRED2Q8IWF2 684 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 OR51S1Q8NGJ8 323 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 OR5M8Q8NGP6 311 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 S100ZQ8WXG8 99 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
LSM2-208ENST00000375661 SLC2A8Q9NY64 477 aa9.51□□□□□ -0.89
LSM2-208ENST00000375661 GPR31O00270 319 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 PGLYRP1O75594 196 aaPredicted RBP9.5□□□□□ -0.89
LSM2-208ENST00000375661 APOA2P02652 100 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 PPP5CP53041 499 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 AP3S2P59780 193 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 TAGLNQ01995 201 aaKnown RBP9.5□□□□□ -0.89
LSM2-208ENST00000375661 TMEM177Q53S58 311 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 CASC10Q5T4H9 136 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 ZNF57Q68EA5 555 aaPredicted RBP9.5□□□□□ -0.89
LSM2-208ENST00000375661 LPCAT3Q6P1A2 487 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 TEX38Q6PEX7 206 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 KCTD9Q7L273 389 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 SLC35E3Q7Z769 313 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 PDPNQ86YL7 162 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 SLC38A6Q8IZM9 456 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 STPG2Q8N412 459 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 Q8N9W7 124 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 NPBQ8NG41 125 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 OR8H1Q8NGG4 311 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 MARCH1Q8TCQ1 289 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 TCTEX1D2Q8WW35 142 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 RAX2Q96IS3 184 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 NOL4LQ96MY1 436 aaPredicted RBP9.5□□□□□ -0.89
LSM2-208ENST00000375661 RNF5Q99942 180 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 GON7Q9BXV9 100 aa9.5□□□□□ -0.89
LSM2-208ENST00000375661 NCBP2LA6PVI3 153 aaKnown RBP9.49□□□□□ -0.89
LSM2-208ENST00000375661 SRRM4A7MD48 611 aaKnown RBP9.49□□□□□ -0.89
LSM2-208ENST00000375661 FCGR3BO75015 233 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 NDUFA3O95167 84 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 RRASP10301 218 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 PI3P19957 117 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 CD40LGP29965 261 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 RPS16P62249 146 aaKnown RBP9.49□□□□□ -0.89
LSM2-208ENST00000375661 ZNF846Q147U1 533 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 MMDQ15546 238 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 PHLDA2Q53GA4 152 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 OR2B11Q5JQS5 317 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 IDO2Q6ZQW0 420 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 FAM71E2Q8N5Q1 922 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 DEDD2Q8WXF8 326 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 BORCS5Q969J3 196 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
LSM2-208ENST00000375661 PRRT1Q99946 306 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 CCDC32Q9BV29 185 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 MCUBQ9NWR8 336 aa9.49□□□□□ -0.89
LSM2-208ENST00000375661 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 NBR2O15453 112 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 PLA2G10O15496 165 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 CRYZL1O95825 349 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 IGLV2-23P01705 113 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 RLN1P04808 185 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 CTSDP07339 412 aaPredicted RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 PGAM2P15259 253 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 FAUP35544 74 aaKnown RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 ECI1P42126 302 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 CDX1P47902 265 aaPredicted RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 RAB25P57735 213 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 RND3P61587 244 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 PSG5Q15238 335 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 RTL8BQ17RB0 113 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 CMTM1Q8IZ96 169 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 ZNF486Q96H40 463 aaPredicted RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 PRR25Q96S07 402 aa9.48□□□□□ -0.89
LSM2-208ENST00000375661 RTBDNQ9BSG5 229 aaPredicted RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 WDR12Q9GZL7 423 aaKnown RBP9.48□□□□□ -0.89
LSM2-208ENST00000375661 SLC2A9Q9NRM0 540 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms