RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MAP1LC3BQ9GZQ8 125 aa9.75□□□□□ -0.85
PDE6C-201ENST00000371447 CEACAM4O75871 244 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 TUBG1P23258 451 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 RAB13P51153 203 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 DLK1P80370 383 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 FFAR4Q5NUL3 377 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 SSMEM1Q8WWF3 244 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 AGMATQ9BSE5 352 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 C16orf97H3BN30 126 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 MGST3O14880 152 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 MMP9P14780 707 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 CCL3L1P16619 93 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
PDE6C-201ENST00000371447 C4orf17Q53FE4 359 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 TRAV38-1A0A0B4J264 116 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 C1orf196B1AJZ1 125 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 LYNX1G3V0Z9 82 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 C15orf65H3BRN8 121 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 SNRPCP09234 159 aaKnown RBP9.74□□□□□ -0.85
PDE6C-201ENST00000371447 LYNX1P0DP58 116 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 CCKARP32238 428 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 ERVK-16P61578 105 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 ETFRF1Q6IPR1 90 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 NIPSNAP3BQ9BS92 247 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 WDR61Q9GZS3 305 aaKnown RBP9.74□□□□□ -0.85
PDE6C-201ENST00000371447 RNF7Q9UBF6 113 aa9.74□□□□□ -0.85
PDE6C-201ENST00000371447 NPIPB11E5RHQ5 1161 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 APELAP0DMC3 54 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 GZMHP20718 246 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 PDZD11Q5EBL8 140 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 ACSM6Q6P461 480 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 SPACA3Q8IXA5 215 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 RPP25LQ8N5L8 163 aaKnown RBP9.73□□□□□ -0.85
PDE6C-201ENST00000371447 LFNGQ8NES3 379 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 MIOXQ9UGB7 285 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 PTPRBP23467 1997 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 SRP19P09132 144 aaKnown RBP9.73□□□□□ -0.85
PDE6C-201ENST00000371447 NQO2P16083 231 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 DUTP33316 252 aaKnown RBP9.73□□□□□ -0.85
PDE6C-201ENST00000371447 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
PDE6C-201ENST00000371447 TMEM108Q6UXF1 575 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 CLDND2Q8NHS1 167 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 KIAA1456Q9P272 454 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 HCFC1P51610 2035 aa9.73□□□□□ -0.85
PDE6C-201ENST00000371447 A0A1B0GWJ7 208 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 DPRXA6NFQ7 191 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 FAM90A27PA6NNH2 459 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 RRHO14718 337 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 CLN5O75503 358 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 MBP02144 154 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 HNF1AP20823 631 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 DEFA6Q01524 100 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 RTP5Q14D33 572 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 CT45A1Q5HYN5 189 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 OR10G4Q8NGN3 311 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 OR10G9Q8NGN4 311 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 OR10G7Q8NGN6 311 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 CT45A3Q8NHU0 189 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 EDARADDQ8WWZ3 215 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 SNX22Q96L94 193 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 TRGV10A0A0A0MS01 117 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 TNFSF4P23510 183 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 MZT1Q08AG7 82 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 ADIRFQ15847 76 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 LRRC75BQ2VPJ9 315 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 CST9LP1Q5W188 147 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 RHOVQ96L33 236 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 DYNLRB1Q9NP97 96 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 IFNL4K9M1U5 179 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 RAB5BP61020 215 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 MRPS11P82912 194 aaKnown RBP9.72□□□□□ -0.85
PDE6C-201ENST00000371447 LINC01560Q8TB33 94 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 Q8TCH9 128 aa9.72□□□□□ -0.85
PDE6C-201ENST00000371447 SAA2-SAA4A0A096LPE2 208 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 SAA2P0DJI9 122 aaPredicted RBP9.71□□□□□ -0.85
PDE6C-201ENST00000371447 CD200P41217 278 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 RPS23P62266 143 aaKnown RBP9.71□□□□□ -0.85
PDE6C-201ENST00000371447 COMMD1Q8N668 190 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 OR4F5Q8NH21 305 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 OR4F4Q96R69 305 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 HSD17B10Q99714 261 aaKnown RBP9.71□□□□□ -0.85
PDE6C-201ENST00000371447 TMEM140Q9NV12 185 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 HSPB7Q9UBY9 170 aa9.71□□□□□ -0.85
PDE6C-201ENST00000371447 TGIF2-C20orf24A0A0A6YYL0 155 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 IGHV3-72A0A0B4J1Y9 119 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 ADH4P08319 380 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 NCMAPQ5T1S8 102 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 IGFL3Q6UXB1 125 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 RBMS3Q6XE24 437 aaKnown RBP9.71□□□□□ -0.86
PDE6C-201ENST00000371447 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 OR8U8P0C7N1 319 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 HABP2Q14520 560 aaPredicted RBP9.71□□□□□ -0.86
PDE6C-201ENST00000371447 SFXN3Q9BWM7 321 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 SAP30LQ9HAJ7 183 aa9.71□□□□□ -0.86
PDE6C-201ENST00000371447 LY6HO94772 140 aa9.7□□□□□ -0.86
PDE6C-201ENST00000371447 ACTL6BO94805 426 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms