RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZNRF1Q8ND25 227 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 IL1F10Q8WWZ1 152 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 COQ2Q96H96 371 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 TENM4Q6N022 2769 aa10.9□□□□□ -0.66
SQSTM1-201ENST00000360718 KIAA1324LA8MWY0 1029 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 OR8U8P0C7N1 319 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 C11orf71Q6IPW1 123 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 PRR18Q8N4B5 295 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 PSMG3Q9BT73 122 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 LIN7CQ9NUP9 197 aaKnown RBP10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 TACC2O95359 2948 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 USF3Q68DE3 2245 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 TRAV39A0A0B4J263 110 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 GLIPR1P48060 266 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 SERF2P84101 59 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 DUX4L9Q6RFH8 374 aaPredicted RBP10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 DTX2Q86UW9 622 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 CACNG5Q9UF02 275 aa10.89□□□□□ -0.67
SQSTM1-201ENST00000360718 RNF212BA8MTL3 300 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 GATCO43716 136 aaKnown RBP10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 SELLP14151 372 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 EDDM3BP56851 147 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 TMEM267Q0VDI3 215 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 PNRC1Q12796 327 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF788Q6ZQV5 615 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 NEU4Q8WWR8 484 aaPredicted RBP10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 GALMQ96C23 342 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 LURAP1Q96LR2 239 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 CCL13Q99616 98 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 LYNX1G3V0Z9 82 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 H3BP45 60 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 TMPRSS2O15393 492 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 LYNX1P0DP58 116 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 IL2RGP31785 369 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 PINX1Q96BK5 328 aaKnown RBP10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 GAFA1Q96PS6 74 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 OR1A1Q9P1Q5 309 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 GNG13Q9P2W3 67 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 LAMP3Q9UQV4 416 aa10.88□□□□□ -0.67
SQSTM1-201ENST00000360718 ODAMA1E959 279 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF727A8MUV8 499 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 LY6HO94772 140 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 GZMHP20718 246 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 ELOBQ15370 118 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 TPRX1Q8N7U7 411 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 MRGPRDQ8TDS7 321 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 P2RX4Q99571 388 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 PARD6GQ9BYG4 376 aaPredicted RBP10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 OR6C3Q9NZP0 311 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 FAM90A26D6RGX4 464 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 SPINT2O43291 252 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 TGOLN2O43493 480 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 IFNA1P01562 189 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 HOXA5P20719 270 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF674Q2M3X9 581 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 LRRC75BQ2VPJ9 315 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 SPOCK3Q9BQ16 436 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
SQSTM1-201ENST00000360718 C12orf77C9JDV5 145 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 CLN5O75503 358 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 CLDN1O95832 211 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 FBP1P09467 338 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 BCL2P10415 239 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF16P17020 682 aaPredicted RBP10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 Q6ZRM9 215 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 FAM216BQ8N7L0 139 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 ZBTB34Q8NCN2 500 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 OR13A1Q8NGR1 328 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 OR13D1Q8NGV5 346 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 NINJ1Q92982 152 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 TOLLIPQ9H0E2 274 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 RPRMQ9NS64 109 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 TMEM242Q9NWH2 141 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 MIOXQ9UGB7 285 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 MMP24Q9Y5R2 645 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 IGKV1-39P01597 117 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 HBZP02008 142 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 IGKV1D-39P04432 117 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 IAPPP10997 89 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 COL8A2P25067 703 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 RAB11AP62491 216 aa10.86□□□□□ -0.67
SQSTM1-201ENST00000360718 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms