RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LNP1A1A4G5 178 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 KBTBD11O94819 623 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 PMELP40967 661 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 CSRP2Q16527 193 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 BCL2L2Q92843 193 aaPredicted RBP12□□□□□ -0.49
SREBF1-202ENST00000355815 R3HDM4Q96D70 268 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 DYNLRB1Q9NP97 96 aa12□□□□□ -0.49
SREBF1-202ENST00000355815 A0A1B0GU03 582 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 M0R1B8 84 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 PDE6DO43924 150 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 NUDT3O95989 172 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 MELTFP08582 738 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
SREBF1-202ENST00000355815 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 LDLRAD2Q5SZI1 272 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 PQLC2Q6ZP29 291 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 ZIC4Q8N9L1 334 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 ALKBH7Q9BT30 221 aaPredicted RBP11.99□□□□□ -0.49
SREBF1-202ENST00000355815 CHRDL1Q9BU40 450 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 MAP1LC3CQ9BXW4 147 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 NUTF2P61970 127 aaKnown RBP11.99□□□□□ -0.49
SREBF1-202ENST00000355815 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 POM121L2Q96KW2 1035 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 TUBA4BQ9H853 241 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.498e-8■■□□□ 11.8
SREBF1-202ENST00000355815 ZNF506Q5JVG8 444 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 DOLPP1Q86YN1 238 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 ABHD14BQ96IU4 210 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 PPP1R14DQ9NXH3 145 aa11.99□□□□□ -0.49
SREBF1-202ENST00000355815 LAMA1P25391 3075 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 RELBQ01201 579 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 TMEM211Q6ICI0 200 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 OR10X1Q8NGY0 326 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 MARS2Q96GW9 593 aaKnown RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 DPRXA6NFQ7 191 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 CD5P06127 495 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF818PQ6ZRF7 136 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 TBL2Q9Y4P3 447 aaKnown RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 F11RQ9Y624 299 aaKnown RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 TFF1P04155 84 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 TRIP6Q15654 476 aaKnown RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 ZCCHC14Q8WYQ9 949 aaKnown RBP11.98□□□□□ -0.49
SREBF1-202ENST00000355815 PMCHL2Q9BQD1 86 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 CYTL1Q9NRR1 136 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
SREBF1-202ENST00000355815 F8VVB4 439 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 F8VWA3 439 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 COL8A1P27658 744 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF664Q8N3J9 261 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 FADS6Q8N9I5 356 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 OR8B2Q96RD0 313 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 CA2P00918 260 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 COX5BP10606 129 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 CD1BP29016 333 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SLC35E4Q6ICL7 350 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 CDPF1Q6NVV7 123 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 WFDC1Q9HC57 220 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 IGKV1-12A0A0C4DH73 117 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 NPIPB13A6NJU9 1138 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 NPIPB4C9JG80 1138 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SERF1AO75920 110 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 IGKV1D-12P01611 117 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 CSN1S1P47710 185 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SP1P08047 785 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 SUPT4H1P63272 117 aaKnown RBP11.97□□□□□ -0.49
SREBF1-202ENST00000355815 ICAM4Q14773 271 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
SREBF1-202ENST00000355815 CISD1Q9NZ45 108 aaKnown RBP11.97□□□□□ -0.49
SREBF1-202ENST00000355815 WIPF3A6NGB9 483 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 C1QTNF9BB2RNN3 333 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 PROB1E7EW31 1015 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 SYNGR3O43761 229 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 ZG16O60844 167 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 CRYBB3P26998 211 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 SRP14P37108 136 aaKnown RBP11.96□□□□□ -0.49
SREBF1-202ENST00000355815 FGFRL1Q8N441 504 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 ZNF106Q9H2Y7 1883 aaKnown RBP11.96□□□□□ -0.49
SREBF1-202ENST00000355815 GTF3C1Q12789 2109 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 OR4C46A6NHA9 309 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 H3BTX0 84 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 DLEU1O43261 78 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 SCGB2A1O75556 95 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 PGLYRP1O75594 196 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-202ENST00000355815 RBP4P02753 201 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 C10orf128Q5T292 105 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 MMD2Q8IY49 270 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 MYOZ1Q9NP98 299 aaPredicted RBP11.96□□□□□ -0.49
SREBF1-202ENST00000355815 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
SREBF1-202ENST00000355815 IGKV1-27A0A075B6S5 117 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 GCSHP23434 173 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms