RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 C21orf62-AS1Q17RA5 79 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 ABHD12Q8N2K0 398 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 TAAR6Q96RI8 345 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 IGKV3D-15A0A087WSY6 115 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 CLDN14O95500 239 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 COL8A2P25067 703 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 SSPNQ14714 243 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 VAMP8Q9BV40 100 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 LINC00473A8K010 186 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 TCL1AP56279 114 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 TDHQ8IZJ6 230 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 NEU1Q99519 415 aa12.31□□□□□ -0.44
CCNF-201ENST00000293968 M0R1X1 148 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 ERVK-16P61578 105 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 OR1L6Q8NGR2 347 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 ZCCHC14Q8WYQ9 949 aaKnown RBP12.3□□□□□ -0.44
CCNF-201ENST00000293968 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 SERTAD4Q9NUC0 356 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 GPR179Q6PRD1 2367 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 A8MXE2 369 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 C1orf194Q5T5A4 169 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 OCC1Q8TAD7 63 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 MRPL18Q9H0U6 180 aaKnown RBP12.3□□□□□ -0.44
CCNF-201ENST00000293968 NCOR1O75376 2440 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 SERF1AO75920 110 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 CNEP1R1Q8N9A8 125 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
CCNF-201ENST00000293968 PRR14LQ5THK1 2151 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
CCNF-201ENST00000293968 OR9G9P0C7N8 305 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 PMCHP20382 165 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 PDLIM4P50479 330 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 PMS2CLQ68D20 193 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 BTF3L4Q96K17 158 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 KCNIP2Q9NS61 270 aa12.3□□□□□ -0.44
CCNF-201ENST00000293968 SNURFLB1AK76 121 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 RAB29O14966 203 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 AGFG2O95081 481 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 SOX8P57073 446 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCNF-201ENST00000293968 ELOVL5Q9NYP7 299 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 NCKAP5O14513 1909 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 SPINT2O43291 252 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 RPLP1P05386 114 aaKnown RBP12.29□□□□□ -0.44
CCNF-201ENST00000293968 OR5I1Q13606 314 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 TUBG2Q9NRH3 451 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 ADAMTS20P59510 1910 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.29□□□□□ -0.44
CCNF-201ENST00000293968 TDGF1P3P51864 188 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
CCNF-201ENST00000293968 RRHO14718 337 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 HOXC12P31275 282 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 MEOX1P50221 254 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
CCNF-201ENST00000293968 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
CCNF-201ENST00000293968 FBXW9Q5XUX1 488 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 TMEM105Q8N8V8 129 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 ZBTB34Q8NCN2 500 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 OR5AU1Q8NGC0 362 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 MS4A5Q9H3V2 200 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 CEP192Q8TEP8 1941 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 C15orf62A8K5M9 175 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 TYMSP04818 313 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 CDKN1AP38936 164 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 RPL31P62899 125 aaKnown RBP12.28□□□□□ -0.44
CCNF-201ENST00000293968 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 NAT8BQ9UHF3 227 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 RP1L1Q8IWN7 2480 aaPredicted RBP12.28□□□□□ -0.44
CCNF-201ENST00000293968 TRAV34A0A0B4J273 112 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 IRF2P14316 349 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 MPV17P39210 176 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 OR8I2Q8N0Y5 310 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 ENY2Q9NPA8 101 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 MBNL3Q9NUK0 354 aaKnown RBP12.28□□□□□ -0.44
CCNF-201ENST00000293968 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
CCNF-201ENST00000293968 MGST1P10620 155 aaKnown RBP12.27□□□□□ -0.44
CCNF-201ENST00000293968 PSG7Q13046 419 aa12.27□□□□□ -0.44
CCNF-201ENST00000293968 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.44
CCNF-201ENST00000293968 SMPD2O60906 423 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 TMEM68Q96MH6 324 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 WIPI2Q9Y4P8 454 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 F2Z2F3 143 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 NTF3P20783 257 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 TFPI2P48307 235 aa12.27□□□□□ -0.45
CCNF-201ENST00000293968 CENPVQ7Z7K6 275 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms