RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NRN1LQ496H8 165 aa13.33□□□□□ -0.27
SMAD6-201ENST00000288840 ACP7Q6ZNF0 438 aa13.33□□□□□ -0.27
SMAD6-201ENST00000288840 ATG2AQ2TAZ0 1938 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 A8MXE2 369 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 GAMTQ14353 236 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 FAM216AQ8WUB2 273 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 FAM122AQ96E09 287 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 MRPS18CQ9Y3D5 142 aaKnown RBP13.33□□□□□ -0.28
SMAD6-201ENST00000288840 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
SMAD6-201ENST00000288840 OR5G3P0C626 314 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 OR10J4P0C629 311 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 CDX1P47902 265 aaPredicted RBP13.33□□□□□ -0.28
SMAD6-201ENST00000288840 ATP5G3P48201 142 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 ERVFC1-1P60608 527 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 SMDT1Q9H4I9 107 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 SIRT7Q9NRC8 400 aa13.33□□□□□ -0.28
SMAD6-201ENST00000288840 COTL1Q14019 142 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 SSX7Q7RTT5 188 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 LURAP1Q96LR2 239 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 TLN1Q9Y490 2541 aaKnown RBP13.32□□□□□ -0.28
SMAD6-201ENST00000288840 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 CDX4O14627 284 aaPredicted RBP13.32□□□□□ -0.28
SMAD6-201ENST00000288840 MLNRO43193 412 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
SMAD6-201ENST00000288840 GATA2P23769 480 aaPredicted RBP13.32□□□□□ -0.28
SMAD6-201ENST00000288840 WDR82Q6UXN9 313 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
SMAD6-201ENST00000288840 LINC00473A8K010 186 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 GZMHP20718 246 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 GNB1P62873 340 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 PLGLAQ15195 96 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 COMMD5Q9GZQ3 224 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 OR51M1Q9H341 326 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 UBE2CO00762 179 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 ZNF705AQ6ZN79 300 aaPredicted RBP13.31□□□□□ -0.28
SMAD6-201ENST00000288840 OR10X1Q8NGY0 326 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 NPCDR1Q9BY65 106 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 PXMP4Q9Y6I8 212 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 MYOD1P15172 320 aa13.31□□□□□ -0.28
SMAD6-201ENST00000288840 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
SMAD6-201ENST00000288840 TMEM210A6NLX4 147 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 ARL14EPLP0DKL9 152 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 SDF2L1Q9HCN8 221 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 CHD3Q12873 2000 aaKnown RBP13.3□□□□□ -0.28
SMAD6-201ENST00000288840 IGHV3-72A0A0B4J1Y9 119 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 SOD3P08294 240 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 PSG5Q15238 335 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 ATP6V1FQ16864 119 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 STUMQ69YW2 141 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 TMEM140Q9NV12 185 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 ATRXP46100 2492 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 A0A087X0M5 115 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 A0A1B0GX30 115 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 B4DEV8 164 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 PLAUP00749 431 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 PRB4P10163 310 aaPredicted RBP13.3□□□□□ -0.28
SMAD6-201ENST00000288840 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
SMAD6-201ENST00000288840 TRAV3A0A0B4J244 114 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 OR9G9P0C7N8 305 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 NTF3P20783 257 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 ZNF726P1Q15940 193 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 COQ2Q96H96 371 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 DERL1Q9BUN8 251 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 PLXNB1O43157 2135 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 PYY3Q5JQD4 70 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 CDPF1Q6NVV7 123 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 HAPLN4Q86UW8 402 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 CPAMD8Q8IZJ3 1885 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 IGKV1D-33P01593 117 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 IGKV1-33P01594 117 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 HOXA5P20719 270 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 NPY1RP25929 384 aa13.29□□□□□ -0.28
SMAD6-201ENST00000288840 RBMXL3Q8N7X1 1067 aaKnown RBP13.29□□□□□ -0.28
SMAD6-201ENST00000288840 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 IGHV2OR16-5A0A0B4J2B6 119 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 RRHO14718 337 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 RNF224P0DH78 156 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 TMEM11P17152 192 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 FAM216BQ8N7L0 139 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 MDS2Q8NDY4 140 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 TMEM18Q96B42 140 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
SMAD6-201ENST00000288840 DPPA3Q6W0C5 159 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 NHLRC2Q8NBF2 726 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 OR4S2Q8NH73 311 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 CALYQ9NYX4 217 aa13.28□□□□□ -0.28
SMAD6-201ENST00000288840 KBTBD11O94819 623 aa13.27□□□□□ -0.28
SMAD6-201ENST00000288840 ADH4P08319 380 aa13.27□□□□□ -0.28
SMAD6-201ENST00000288840 RPL23P62829 140 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms