RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
NUP54-201ENST00000264883 LGALS4P56470 323 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 LRRC10Q5BKY1 277 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 NIT1Q86X76 327 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 OR4F17Q8NGA8 305 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 BORCS7Q96B45 105 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 RCHY1Q96PM5 261 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 QTRT1Q9BXR0 403 aaKnown RBP11.04□□□□□ -0.64
NUP54-201ENST00000264883 PRDM14Q9GZV8 571 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 IGHV3-15A0A0B4J1V0 119 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 CLDN1O95832 211 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
NUP54-201ENST00000264883 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 C19orf35Q6ZS72 473 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 PIGCQ92535 297 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 RDH5Q92781 318 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 OR2H1Q9GZK4 316 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 ATP23Q9Y6H3 246 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 C17orf112F2Z3M2 114 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 ZIC3O60481 467 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 CER1O95813 267 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 CA2P00918 260 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 FGF12P61328 243 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 TFF3Q07654 80 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 MRPL14Q6P1L8 145 aaKnown RBP11.03□□□□□ -0.64
NUP54-201ENST00000264883 SFXN3Q9BWM7 321 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 TRBV6-6A0A0A6YYG2 114 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 A0A0J9YW62 118 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 TOX4O94842 621 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 ARG2P78540 354 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 CCL7P80098 99 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 FOXB1Q99853 325 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 C1QTNF5Q9BXJ0 243 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 NAT8BQ9UHF3 227 aa11.03□□□□□ -0.64
NUP54-201ENST00000264883 TRAV9-2A0A087WT02 112 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 SSR4P51571 173 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 HTD2P86397 168 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 RPEL1Q2QD12 228 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 ZNF837Q96EG3 531 aaPredicted RBP11.02□□□□□ -0.65
NUP54-201ENST00000264883 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
NUP54-201ENST00000264883 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 ASCC3Q8N3C0 2202 aaKnown RBP11.02□□□□□ -0.65
NUP54-201ENST00000264883 ODAMA1E959 279 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 TNFSF11O14788 317 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 TAX1BP3O14907 124 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 LCN12Q6JVE5 192 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 AAED1Q7RTV5 226 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 MKXQ8IYA7 352 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 FAM58AQ8N1B3 248 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 SH2D2AQ9NP31 389 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 OR2W1Q9Y3N9 320 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 GPR179Q6PRD1 2367 aa11.02□□□□□ -0.65
NUP54-201ENST00000264883 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 NTF3P20783 257 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 CLDN18P56856 261 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 KIAA1644Q3SXP7 199 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 LHFPL4Q7Z7J7 247 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 VASH2Q86V25 355 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 ST6GALNAC3Q8NDV1 305 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 OR1L1Q8NH94 360 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 SRXN1Q9BYN0 137 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 MEGF9Q9H1U4 602 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 ZNF430Q9H8G1 570 aaPredicted RBP11.01□□□□□ -0.65
NUP54-201ENST00000264883 IGHV5-10-1A0A0J9YXX1 117 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 OR2T8A6NH00 312 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 HSPB6O14558 160 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 MT-ND6P03923 174 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 CCL3P10147 92 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 B4GALT1P15291 398 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 PSG7Q13046 419 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
NUP54-201ENST00000264883 LPAL2Q16609 132 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 WDR73Q6P4I2 378 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 OR4P4Q8NGL7 312 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 CLEC7AQ9BXN2 247 aa11.01□□□□□ -0.65
NUP54-201ENST00000264883 ERRFI1Q9UJM3 462 aaPredicted RBP11.01□□□□□ -0.65
NUP54-201ENST00000264883 KIAA1549Q9HCM3 1950 aa11□□□□□ -0.65
NUP54-201ENST00000264883 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
NUP54-201ENST00000264883 ZNF716A6NP11 495 aa11□□□□□ -0.65
NUP54-201ENST00000264883 SIRPB1O00241 398 aa11□□□□□ -0.65
NUP54-201ENST00000264883 IGLL1P15814 213 aa11□□□□□ -0.65
NUP54-201ENST00000264883 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
NUP54-201ENST00000264883 SRD5A2P31213 254 aa11□□□□□ -0.65
NUP54-201ENST00000264883 ZNF324BQ6AW86 544 aaPredicted RBP11□□□□□ -0.65
NUP54-201ENST00000264883 PCSK4Q6UW60 755 aa11□□□□□ -0.65
NUP54-201ENST00000264883 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms