RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 RELQ04864 619 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-201ENST00000254667 SCGB1D4Q6XE38 83 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 TET1Q8NFU7 2136 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 OR4C5Q8NGB2 326 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 OR51G1Q8NGK1 321 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 OSR1Q8TAX0 266 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-201ENST00000254667 AURKAIP1Q9NWT8 199 aaPredicted RBP16.13■□□□□ 0.17
PTPRE-201ENST00000254667 LEAP2Q969E1 77 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 FCGR2BP31994 310 aaPredicted RBP16.12■□□□□ 0.17
PTPRE-201ENST00000254667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.12■□□□□ 0.17
PTPRE-201ENST00000254667 C9orf172C9J069 976 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 MAS1LP35410 378 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 ZNF137PP52743 207 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 EEF1AKMT3Q96AZ1 226 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 PET117Q6UWS5 81 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 ZNRF1Q8ND25 227 aa16.12■□□□□ 0.17
PTPRE-201ENST00000254667 SMIM6P0DI80 62 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 MEF2CQ06413 473 aaPredicted RBP16.11■□□□□ 0.17
PTPRE-201ENST00000254667 IGHV1-2P23083 117 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 RND3P61587 244 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 FXYD3Q14802 87 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 RTN4RL2Q86UN3 420 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 TRAV34A0A0B4J273 112 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 IQCF6A8MYZ5 107 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 H2BFSP57053 126 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 CFHR1Q03591 330 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 TWIST1Q15672 202 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 LHX2P50458 406 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 RNFT1Q5M7Z0 435 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 OR51M1Q9H341 326 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
PTPRE-201ENST00000254667 GUCA2BQ16661 112 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 C12orf77C9JDV5 145 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 PSMG3Q9BT73 122 aaPredicted RBP16.1■□□□□ 0.17
PTPRE-201ENST00000254667 PRO1933Q9H354 126 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 A0A0G2JMZ2 1700 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 LRRC37A2A6NM11 1700 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 NTN3O00634 580 aaPredicted RBP16.1■□□□□ 0.17
PTPRE-201ENST00000254667 KLF7O75840 302 aaPredicted RBP16.1■□□□□ 0.17
PTPRE-201ENST00000254667 DHRS11Q6UWP2 260 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 MRPL13Q9BYD1 178 aaKnown RBP16.1■□□□□ 0.17
PTPRE-201ENST00000254667 AP5S1Q9NUS5 200 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 ANKRD36A6QL64 1941 aa16.1■□□□□ 0.17
PTPRE-201ENST00000254667 C1QL1O75973 258 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 PLAUP00749 431 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 GATAD1Q8WUU5 269 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 CD8AP01732 235 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 TFPI2P48307 235 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 BSPH1Q075Z2 132 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 SPSB4Q96A44 273 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 GPHA2Q96T91 129 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 RP1P56715 2156 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 DLX1P56177 255 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 DPM3Q9P2X0 92 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 SVILO95425 2214 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 C1QL2Q7Z5L3 287 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 HLA-DQA1P01909 254 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 PSG7Q13046 419 aa16.09■□□□□ 0.17
PTPRE-201ENST00000254667 FAM186AA6NE01 2351 aa16.08■□□□□ 0.17
PTPRE-201ENST00000254667 TP53RKQ96S44 253 aa16.08■□□□□ 0.17
PTPRE-201ENST00000254667 LTBP1Q14766 1721 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 DDB2Q92466 427 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 GALNT14Q96FL9 552 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 GGACTQ9BVM4 153 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 CCDC88CQ9P219 2028 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 DANCRP0C864 163 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 C9orf106Q8NAJ2 232 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 SSBP3Q9BWW4 388 aaPredicted RBP16.08■□□□□ 0.16
PTPRE-201ENST00000254667 GDF9O60383 454 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 NPPCP23582 126 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 OR8A1Q8NGG7 326 aa16.08■□□□□ 0.16
PTPRE-201ENST00000254667 A0A0G2JK05 382 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 A0A1B0GTI1 187 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 ACAA1P09110 424 aaPredicted RBP16.07■□□□□ 0.16
PTPRE-201ENST00000254667 RAX2Q96IS3 184 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 LY6EQ16553 131 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 EAF1Q96JC9 268 aaPredicted RBP16.07■□□□□ 0.16
PTPRE-201ENST00000254667 PIKFYVEQ9Y2I7 2098 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 KBTBD11-OT1A0A1B0GTJ5 212 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 TSPOP30536 169 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 RNASE6Q93091 150 aaKnown RBP16.07■□□□□ 0.16
PTPRE-201ENST00000254667 NABP2Q9BQ15 211 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 ARL14EPLP0DKL9 152 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 RELBQ01201 579 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 ELOVL1Q9BW60 279 aa16.07■□□□□ 0.16
PTPRE-201ENST00000254667 NPIPB6E9PJ23 425 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 IGFBP3P17936 291 aaPredicted RBP16.06■□□□□ 0.16
PTPRE-201ENST00000254667 GCSHP23434 173 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 LCTP09848 1927 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 SHISA3A0PJX4 238 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 RRN3P1Q2M238 152 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 ZFP30Q9Y2G7 519 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 C17orf100A8MU93 164 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 NPIPB3Q92617 1050 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 PQLC2LA1A4F0 135 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 UCP1P25874 307 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 VKORC1L1Q8N0U8 176 aa16.06■□□□□ 0.16
PTPRE-201ENST00000254667 RPL39P5Q59GN2 51 aa16.05■□□□□ 0.16
PTPRE-201ENST00000254667 DCAF16Q9NXF7 216 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms