RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Timm50Q9D880 353 aa13.16□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Ntn3Q9R1A3 580 aa13.16□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Ighv1-20A0A0A6YX66 117 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 CrnnD3YUU6 520 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 P01630 113 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 LtaP09225 202 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 DbpQ60925 325 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Tmprss11fQ8BHM9 439 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Chpt1Q8C025 398 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Inpp5kQ8C5L6 468 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Pxdc1Q8JZU6 231 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Olfr1347Q8VF33 319 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Olfr1270Q8VGP3 304 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Olfr943Q9EQ92 314 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 SclyQ9JLI6 432 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Cldn15Q9Z0S5 227 aa13.15□□□□□ -0.3
Tpm1-215ENSMUST00000113705 Ighv4-1A0A075B5R5 116 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr1247A2AT78 314 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gm21560D3Z7A4 205 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gm20695H3BLK7 282 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Pdcd6P12815 191 aaKnown RBP13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 PpicP30412 212 aaKnown RBP13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 PitpnbP53811 271 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Q504N7 393 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 A730061H03RikQ8BGD2 154 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gpr4Q8BUD0 365 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr303Q8VFP0 319 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr669Q8VGU9 317 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Hcfc1r1Q9CYQ5 120 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Spink12Q9D256 87 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Cldn23Q9D7D7 296 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Rbmxl2Q9DAE2 385 aaKnown RBP13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Hmg20aQ9DC33 346 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 RhouQ9EQT3 261 aa13.15□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ighv1-24A0A0A6YY24 117 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Tcstv1O70619 171 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Stfa1P35175 97 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Cxcl5P50228 132 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Naa50Q6PGB6 169 aaKnown RBP13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ncs1Q8BNY6 190 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 TbccQ8VCN9 341 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr1420Q8VF55 309 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr1258Q8VGN6 311 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Q9CX63 252 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ptges3lQ9D9A7 131 aa13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Znf593Q9DB42 134 aaKnown RBP13.14□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Tstd1E9PY03 133 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 P01759 136 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Lyz1P17897 148 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 SnrpbP27048 231 aaKnown RBP13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Tacr3P47937 452 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 ArsgQ3TYD4 525 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 CelQ64285 599 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Dpp10Q6NXK7 797 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Parp16Q7TMM8 322 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 CdsnQ7TPC1 561 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Fads6Q80UG1 342 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr1038Q8VGS1 319 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gpx6Q91WR8 221 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Aig1Q9D8B1 262 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Rbfox1Q9JJ43 396 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Alyref2Q9JJW6 218 aa13.13□□□□□ -0.31
Tpm1-215ENSMUST00000113705 CtcflA2APF3 636 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Rnaset2aC0HKG5 259 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Rnaset2bC0HKG6 259 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Olfr1471F6QVZ8 314 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Zfp955bL7N232 545 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ascl4M0QW46 144 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Brd7O88665 651 aaKnown RBP13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ube2e1P52482 193 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Vbp1P61759 196 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Kcnj3P63250 501 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Mex3bQ69Z36 601 aaKnown RBP13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Spin2cQ6NVE3 257 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 TigarQ8BZA9 269 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Akr1c18Q8K023 323 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Rbm39Q8VH51 530 aaKnown RBP13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Mrpl42Q9CPV3 142 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 4930447A16RikQ9D5F6 132 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Polg2Q9QZM2 459 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Stab1Q8R4Y4 2571 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gm28778A0A087WSK7 233 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Dcst2A0A140LIJ0 701 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Birc7A2AWP0 285 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Ovol3D3YYM0 189 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gm4884E9PVP9 694 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Cldn20G5E8X0 219 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Gm20918J3QN17 227 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 PhyhO35386 338 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 TfpiO54819 306 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 RelP15307 587 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Lhfpl4Q5U4E0 247 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Tgm6Q8BM11 706 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Q8WUR0 141 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 BambiQ9D0L6 260 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Fbp1Q9QXD6 338 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 SpdefQ9WTP3 325 aa13.12□□□□□ -0.31
Tpm1-215ENSMUST00000113705 PkdrejQ9Z0T6 2126 aa13.11□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Vmn1r180B9EK86 305 aa13.11□□□□□ -0.31
Tpm1-215ENSMUST00000113705 Tnfaip6O08859 275 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms