RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Vmn1r236Q05A06 334 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rps27Q6ZWU9 84 aaKnown RBP12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mmd2Q8R189 247 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ntmt1Q8R2U4 223 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ccl27Q9Z1X0 120 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r115K7N6Y3 295 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Q6PIU9 354 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Znf2Q8BIQ3 427 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r85Q8VIB8 308 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 1700029F12RikQ9CRB4 147 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 MioxQ9QXN5 285 aa12.46□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Col8a1Q00780 744 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Htr1dQ61224 374 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tmeff1Q6PFE7 372 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Spsb1Q9D5L7 273 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 EnamO55196 1274 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ifitm10Q8BR26 201 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr483Q8VG05 315 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Derl3Q9D8K3 228 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 1700069L16RikQ9D9H5 109 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Bhlha15Q9QYC3 197 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cacna1hO88427 2365 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sptbn1Q62261 2363 aaKnown RBP12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm45623A0A1B0GSF6 103 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fam98cE9PYD1 344 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Crisp3Q03402 241 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cnn1Q08091 297 aaKnown RBP12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Lclat1Q3UN02 376 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1030Q8VFL5 318 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 AY761184Q9D848 116 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Trav8d-1Q5R1H8 112 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Utp4Q8R2N2 686 aaKnown RBP12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sectm1bQ9JL59 212 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm10666K7N6B8 321 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r121K7N6J4 314 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Acvr1P37172 509 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Asphd2Q80VP9 343 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Aifm1Q9Z0X1 612 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Trav8n-2A0A075B633 112 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm14399A2ARW8 610 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm12886B1AZM5 119 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Hmx2P43687 273 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Csf2raQ00941 388 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gng10Q9CXP8 68 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Skint9A7TZG3 319 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sap30lQ5SQF8 182 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr25Q7TRD6 313 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1392Q8VFA6 311 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr56Q8VGD6 315 aa12.45□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r149E9PWL6 307 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r101E9Q365 307 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r158G3UY92 307 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cldn20G5E8X0 219 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr898L7N1Z5 316 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Pet100P0DJE0 76 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 FahP35505 419 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 ScimpQ3UU41 150 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 NppcQ61839 126 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Zfp92Q62396 488 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Npepl1Q6NSR8 524 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Prr32A2AFE9 284 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 GmlE9PX31 176 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ccl22O88430 92 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Spata22Q5SV06 358 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Spns2Q91VM4 549 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ccdc198Q9CPZ1 294 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 4933402D24RikQ9D4D3 167 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fer1l5P0DM40 2038 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1191-ps1A0A1L1STD5 311 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 2010106E10RikA2ANY3 279 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Vmn1r7E9Q8T0 311 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mfsd4b3Q3UN21 355 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Insm1Q63ZV0 521 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Lpar6Q8BMC0 344 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Wfdc6aQ3UW55 136 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ldlrad2Q3V0V0 142 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Trappc1Q5NCF2 145 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr967Q7TRA6 310 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 SelenofQ9ERR7 162 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Msgn1Q9JK54 188 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Med12lQ8BQM9 2157 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ighv9-2A0A0B4J1J4 117 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 FcmrA1KXC4 422 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cd300cA2A7V7 229 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr191L7N1Z8 309 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 NcanP55066 1268 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Q5SPV6 233 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Zdhhc8Q5Y5T5 762 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr904Q7TRC9 310 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 RhofQ8BYP3 211 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm9938Q8C3P5 112 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Bcdin3dQ91YP1 285 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rhebl1Q9D8T3 184 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Wwtr1Q9EPK5 395 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr632Q9EPN9 317 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fnd3c2A2AP83 941 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1329L7MTV4 313 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ccl5P30882 91 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cldn18P56857 264 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Slc17a2Q5SZA1 478 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms