RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YNL162W-AQ3E7A8 72 aa5.74□□□□□ -1.49
VAM3YOR106W APM4Q99186 491 aa5.74□□□□□ -1.49
VAM3YOR106W BRN1P38170 754 aa5.73□□□□□ -1.49
VAM3YOR106W DOS2P54858 310 aa5.73□□□□□ -1.49
VAM3YOR106W FDC1Q03034 503 aa5.73□□□□□ -1.49
VAM3YOR106W COQ11Q05892 277 aa5.73□□□□□ -1.49
VAM3YOR106W PHO5P00635 467 aa5.72□□□□□ -1.49
VAM3YOR106W PRE4P30657 266 aa5.72□□□□□ -1.49
VAM3YOR106W PMC1P38929 1173 aaPredicted RBP5.72□□□□□ -1.49
VAM3YOR106W MIT1P40002 666 aa5.72□□□□□ -1.49
VAM3YOR106W TMN3P40071 706 aa5.72□□□□□ -1.49
VAM3YOR106W VID28P40547 921 aa5.72□□□□□ -1.49
VAM3YOR106W THI6P41835 540 aa5.72□□□□□ -1.49
VAM3YOR106W DAK1P54838 584 aaKnown RBP5.72□□□□□ -1.49
VAM3YOR106W YDR179W-AQ03983 463 aa5.72□□□□□ -1.49
VAM3YOR106W SLK19Q08581 821 aaKnown RBP5.72□□□□□ -1.49
VAM3YOR106W RPS21AP0C0V8 87 aaKnown RBP5.71□□□□□ -1.5
VAM3YOR106W FAT1P38225 669 aa5.71□□□□□ -1.5
VAM3YOR106W ENP2P48234 707 aaKnown RBP5.71□□□□□ -1.5
VAM3YOR106W YGL081WP53156 320 aa5.71□□□□□ -1.5
VAM3YOR106W SNF12P53628 566 aa5.71□□□□□ -1.5
VAM3YOR106W SAT4P25333 603 aaKnown RBP5.7□□□□□ -1.5
VAM3YOR106W YHR033WP38690 423 aa5.7□□□□□ -1.5
VAM3YOR106W ASN1P49089 572 aaKnown RBP5.7□□□□□ -1.5
VAM3YOR106W AIM44Q99299 758 aa5.7□□□□□ -1.5
VAM3YOR106W TPK2P06245 380 aa5.69□□□□□ -1.5
VAM3YOR106W UGP1P32861 499 aaKnown RBP5.69□□□□□ -1.5
VAM3YOR106W PPE1P38796 400 aa5.69□□□□□ -1.5
VAM3YOR106W CRG1P38892 291 aaRIP-Chip data5.69□□□□□ -1.5not detected
VAM3YOR106W PRM2P40534 656 aa5.69□□□□□ -1.5
VAM3YOR106W RNR4P49723 345 aaKnown RBP5.69□□□□□ -1.5
VAM3YOR106W CEF1Q03654 590 aaPredicted RBP5.69□□□□□ -1.5
VAM3YOR106W TRS23Q03784 219 aa5.69□□□□□ -1.5
VAM3YOR106W HLR1Q04429 423 aa5.69□□□□□ -1.5
VAM3YOR106W AIM41Q12032 185 aa5.69□□□□□ -1.5
VAM3YOR106W ADE5,7P07244 802 aaKnown RBP5.68□□□□□ -1.5
VAM3YOR106W TUP1P16649 713 aa5.68□□□□□ -1.5
VAM3YOR106W ACO1P19414 778 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
VAM3YOR106W VPS34P22543 875 aa5.68□□□□□ -1.5
VAM3YOR106W ORC2P32833 620 aa5.68□□□□□ -1.5
VAM3YOR106W FTR1P40088 404 aa5.68□□□□□ -1.5
VAM3YOR106W TIM50Q02776 476 aa5.68□□□□□ -1.5
VAM3YOR106W FMP30Q02883 468 aa5.68□□□□□ -1.5
VAM3YOR106W MRI1Q06489 411 aaKnown RBP5.68□□□□□ -1.5
VAM3YOR106W HOM2P13663 365 aaKnown RBP5.67□□□□□ -1.5
VAM3YOR106W CDC26P14724 124 aa5.67□□□□□ -1.5
VAM3YOR106W DGR2P32330 852 aa5.67□□□□□ -1.5
VAM3YOR106W MFM1Q02783 413 aa5.67□□□□□ -1.5
VAM3YOR106W THI7Q05998 598 aa5.67□□□□□ -1.5
VAM3YOR106W RMP1Q12530 201 aa5.67□□□□□ -1.5
VAM3YOR106W MF(ALPHA)2P32435 120 aa5.66□□□□□ -1.5
VAM3YOR106W PIH1P38768 344 aa5.66□□□□□ -1.5
VAM3YOR106W YEL025CP39991 1188 aa5.66□□□□□ -1.5
VAM3YOR106W YGR054WP53235 642 aaKnown RBP5.66□□□□□ -1.5
VAM3YOR106W ULA1Q12059 462 aa5.66□□□□□ -1.5
VAM3YOR106W STE4P18851 423 aa5.65□□□□□ -1.5
VAM3YOR106W DHR2P36009 735 aaPredicted RBP5.65□□□□□ -1.5
VAM3YOR106W CDS1P38221 457 aa5.65□□□□□ -1.5
VAM3YOR106W RIM4P38741 713 aa5.65□□□□□ -1.5
VAM3YOR106W EFR3Q03653 782 aaKnown RBP5.65□□□□□ -1.5
VAM3YOR106W YCG1Q06680 1035 aa5.65□□□□□ -1.5
VAM3YOR106W YPR027CQ12079 277 aa5.65□□□□□ -1.5
VAM3YOR106W YMC1P32331 307 aa5.64□□□□□ -1.51
VAM3YOR106W MRPL7P36519 292 aa5.64□□□□□ -1.51
VAM3YOR106W UBP12P39538 1254 aa5.64□□□□□ -1.51
VAM3YOR106W DUG1P43616 481 aaKnown RBP5.64□□□□□ -1.51
VAM3YOR106W ATG36P46983 293 aa5.64□□□□□ -1.51
VAM3YOR106W YIP4P53093 235 aa5.64□□□□□ -1.51
VAM3YOR106W YPL216WQ08964 1102 aa5.64□□□□□ -1.51
VAM3YOR106W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VAM3YOR106W CPR8P53728 308 aa5.63□□□□□ -1.51
VAM3YOR106W SQS1P53866 767 aaKnown RBP5.63□□□□□ -1.51
VAM3YOR106W SKY1Q03656 742 aa5.63□□□□□ -1.51
VAM3YOR106W OSW1Q08692 278 aa5.63□□□□□ -1.51
VAM3YOR106W HMG2P12684 1045 aa5.62□□□□□ -1.51
VAM3YOR106W DAL3P32459 195 aa5.62□□□□□ -1.51
VAM3YOR106W HXT4P32467 576 aa5.62□□□□□ -1.51
VAM3YOR106W EHT1P38295 451 aa5.62□□□□□ -1.51
VAM3YOR106W YEN1P40028 759 aa5.62□□□□□ -1.51
VAM3YOR106W PEA2P40091 420 aa5.62□□□□□ -1.51
VAM3YOR106W HOF1Q05080 669 aa5.62□□□□□ -1.51
VAM3YOR106W YDL073WQ07454 984 aa5.62□□□□□ -1.51
VAM3YOR106W TUF1P02992 437 aaKnown RBP5.61□□□□□ -1.51
VAM3YOR106W ERG11P10614 530 aa5.61□□□□□ -1.51
VAM3YOR106W MDM10P18409 493 aa5.61□□□□□ -1.51
VAM3YOR106W AEP2P22136 580 aa5.61□□□□□ -1.51
VAM3YOR106W MTC7P32633 139 aa5.61□□□□□ -1.51
VAM3YOR106W SER1P33330 395 aaKnown RBP5.61□□□□□ -1.51
VAM3YOR106W YGL117WP53133 265 aa5.61□□□□□ -1.51
VAM3YOR106W NGL1Q08213 363 aaKnown RBP5.61□□□□□ -1.51
VAM3YOR106W TRE2Q08693 809 aa5.61□□□□□ -1.51
VAM3YOR106W ZPS1Q12512 249 aa5.61□□□□□ -1.51
VAM3YOR106W SRP68P38687 599 aaKnown RBP5.6□□□□□ -1.51
VAM3YOR106W GPP2P40106 250 aaKnown RBP5.6□□□□□ -1.51
VAM3YOR106W BUD17P53727 317 aa5.6□□□□□ -1.51
VAM3YOR106W HOP1P20050 605 aa5.59□□□□□ -1.51
VAM3YOR106W ATP12P22135 325 aa5.59□□□□□ -1.51
VAM3YOR106W AAD3P25612 363 aa5.59□□□□□ -1.51
VAM3YOR106W CNE1P27825 502 aa5.59□□□□□ -1.51
VAM3YOR106W CAP1P28495 268 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 82.9 ms