RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	CET1	O13297	549 aa	Predicted RBP	12.57	□□□□□ -0.4
DSK2	YMR276W	ENO2	P00925	437 aa	Known RBP	12.57	□□□□□ -0.4
DSK2	YMR276W	PUT4	P15380	627 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	KAR3	P17119	729 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	SPO12	P17123	173 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	SWE1	P32944	819 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	YKL050C	P35736	922 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	HSL7	P38274	827 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	TIF5	P38431	405 aa	Known RBP	12.57	□□□□□ -0.4
DSK2	YMR276W	YGR111W	P53265	400 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	COQ6	P53318	479 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	PIR3	Q03180	325 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	AIM32	Q04689	311 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	YDR222W	Q04925	415 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	YOR387C	Q08910	206 aa		12.57	□□□□□ -0.4
DSK2	YMR276W	REV1	P12689	985 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	SEC1	P30619	724 aa	Known RBP	12.56	□□□□□ -0.4
DSK2	YMR276W	ECM32	P32644	1121 aa	Known RBP	12.56	□□□□□ -0.4
DSK2	YMR276W	SGE1	P33335	543 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	YCG1	Q06680	1035 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	YPR084W	Q06821	456 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	SIL1	Q08199	421 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	ATG9	Q12142	997 aa		12.56	□□□□□ -0.4
DSK2	YMR276W	KIN3	P22209	435 aa		12.55	□□□□□ -0.4
DSK2	YMR276W	FAA4	P47912	694 aa	Known RBP	12.55	□□□□□ -0.4
DSK2	YMR276W	COP1	P53622	1201 aa	Known RBP	12.55	□□□□□ -0.4
DSK2	YMR276W	YPL014W	Q02606	381 aa		12.55	□□□□□ -0.4
DSK2	YMR276W	OPY2	Q06810	360 aa		12.55	□□□□□ -0.4
DSK2	YMR276W	VPS5	Q92331	675 aa		12.55	□□□□□ -0.4
DSK2	YMR276W	EST1	P17214	699 aa	Predicted RBP	12.54	□□□□□ -0.4
DSK2	YMR276W	FMO1	P38866	432 aa		12.54	□□□□□ -0.4
DSK2	YMR276W	PSY2	P40164	858 aa		12.54	□□□□□ -0.4
DSK2	YMR276W	YJR079W	P47126	109 aa		12.54	□□□□□ -0.4
DSK2	YMR276W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	12.54	□□□□□ -0.4	not detected
DSK2	YMR276W	YNL144C	P53907	740 aa		12.54	□□□□□ -0.4
DSK2	YMR276W	SXM1	Q04175	944 aa	Known RBP	12.54	□□□□□ -0.4
DSK2	YMR276W	ERV41	Q04651	352 aa		12.54	□□□□□ -0.4
DSK2	YMR276W	RTN1	Q04947	295 aa	Known RBP	12.54	□□□□□ -0.4
DSK2	YMR276W	ECM38	Q05902	660 aa	Predicted RBP	12.54	□□□□□ -0.4
DSK2	YMR276W	NEW1	Q08972	1196 aa	Known RBP	12.54	□□□□□ -0.4
DSK2	YMR276W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	12.53	□□□□□ -0.4	not detected
DSK2	YMR276W	HOM2	P13663	365 aa	Known RBP	12.53	□□□□□ -0.4
DSK2	YMR276W	YIH1	P25637	258 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	STE5	P32917	917 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	KTR4	P38131	464 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	LYS9	P38999	446 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	YER189W	P40104	122 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	ATG3	P40344	310 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	ERG10	P41338	398 aa	Known RBP	12.53	□□□□□ -0.4
DSK2	YMR276W	RMD8	P43620	662 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	STR2	P47164	639 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	YNR065C	P53751	1116 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	YRR1	Q12172	810 aa		12.53	□□□□□ -0.4
DSK2	YMR276W	CAP1	P28495	268 aa	Known RBP	12.52	□□□□□ -0.41
DSK2	YMR276W	MIC60	P36112	540 aa		12.52	□□□□□ -0.41
DSK2	YMR276W	SAP185	P40856	1058 aa		12.52	□□□□□ -0.41
DSK2	YMR276W	RTT101	P47050	842 aa		12.52	□□□□□ -0.41
DSK2	YMR276W	ERG5	P54781	538 aa		12.52	□□□□□ -0.41
DSK2	YMR276W	SYH1	Q02875	849 aa	Known RBP	12.52	□□□□□ -0.41
DSK2	YMR276W	CIR2	Q08822	631 aa		12.52	□□□□□ -0.41
DSK2	YMR276W	SPT23	P35210	1082 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	MPE1	P35728	441 aa	Known RBP	12.51	□□□□□ -0.41
DSK2	YMR276W	HEM14	P40012	539 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	TMN3	P40071	706 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	TMA108	P40462	946 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	NMA2	P53204	395 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	YGR021W	P53212	290 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	KTR6	P54070	446 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	GYL1	Q04322	720 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	AAD4	Q07747	329 aa		12.51	□□□□□ -0.41
DSK2	YMR276W	NCL1	P38205	684 aa	Known RBP	12.5	□□□□□ -0.41
DSK2	YMR276W	NMD3	P38861	518 aa	Known RBP	12.5	□□□□□ -0.41
DSK2	YMR276W	UBP7	P40453	1071 aa		12.5	□□□□□ -0.41
DSK2	YMR276W	PEX31	P53203	462 aa		12.5	□□□□□ -0.41
DSK2	YMR276W	YGR283C	P53336	341 aa	Predicted RBP	12.5	□□□□□ -0.41
DSK2	YMR276W	ELP3	Q02908	557 aa	Known RBP	12.5	□□□□□ -0.41
DSK2	YMR276W	UTP5	Q04177	643 aa	Known RBP	12.5	□□□□□ -0.41
DSK2	YMR276W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	12.5	□□□□□ -0.41	not detected
DSK2	YMR276W	YPK1	P12688	680 aa	Known RBP	12.49	□□□□□ -0.41
DSK2	YMR276W	CYC8	P14922	966 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	FPR1	P20081	114 aa	Known RBP	12.49	□□□□□ -0.41
DSK2	YMR276W	MSH2	P25847	964 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	ABD1	P32783	436 aa	Predicted RBP	12.49	□□□□□ -0.41
DSK2	YMR276W	SEC6	P32844	805 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	YMR124W	P39523	943 aa	Known RBP	12.49	□□□□□ -0.41
DSK2	YMR276W	YIL054W	P40524	105 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	YMR206W	Q03695	313 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	YMR018W	Q04364	514 aa		12.49	□□□□□ -0.41
DSK2	YMR276W	IRA2	P19158	3079 aa		12.48	□□□□□ -0.41
DSK2	YMR276W	SWC5	P38326	303 aa		12.48	□□□□□ -0.41
DSK2	YMR276W	URA8	P38627	578 aa	Predicted RBP	12.48	□□□□□ -0.41
DSK2	YMR276W	PRP24	P49960	444 aa	Known RBP	12.48	□□□□□ -0.41
DSK2	YMR276W	TRM112	P53738	135 aa	Predicted RBP	12.48	□□□□□ -0.41
DSK2	YMR276W	NIS1	P53939	407 aa		12.48	□□□□□ -0.41
DSK2	YMR276W	RKM2	Q03942	479 aa		12.48	□□□□□ -0.41
DSK2	YMR276W	YML053C	Q04978	212 aa		12.48	□□□□□ -0.41
DSK2	YMR276W	MTF2	P10849	440 aa		12.47	□□□□□ -0.41
DSK2	YMR276W	MET22	P32179	357 aa		12.47	□□□□□ -0.41
DSK2	YMR276W	CSE1	P33307	960 aa		12.47	□□□□□ -0.41
DSK2	YMR276W	PRM9	P39551	298 aa		12.47	□□□□□ -0.41

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms