RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	DDC1	Q08949	612 aa		11.91	□□□□□ -0.5
CWP1	YKL096W	APL5	Q08951	932 aa	Known RBP	11.91	□□□□□ -0.5
CWP1	YKL096W	HRT3	Q12347	344 aa		11.91	□□□□□ -0.5
CWP1	YKL096W	CDC8	P00572	216 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	PRP9	P19736	530 aa	Known RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.9	□□□□□ -0.5	not detected
CWP1	YKL096W	GCD6	P32501	712 aa	Known RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	YBR053C	P38235	358 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	SIF2	P38262	535 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	HSL7	P38274	827 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	STB5	P38699	743 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	AVT2	P39981	480 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	NMD5	P46970	1048 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	YJL045W	P47052	634 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	YML6	P51998	286 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	YGR283C	P53336	341 aa	Predicted RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	YNL040W	P53960	456 aa	Predicted RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	RPL22B	P56628	122 aa	Known RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	LEA1	Q08963	238 aa	Predicted RBP	11.9	□□□□□ -0.5
CWP1	YKL096W	YDR018C	Q12185	396 aa		11.9	□□□□□ -0.5
CWP1	YKL096W	UBC6	P33296	250 aa	Predicted RBP	11.89	□□□□□ -0.51
CWP1	YKL096W	YBR056W	P38081	501 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	TIF5	P38431	405 aa	Known RBP	11.89	□□□□□ -0.51
CWP1	YKL096W	MSG5	P38590	489 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	FMP10	P40098	244 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	MMF1	P40185	145 aa	Known RBP	11.89	□□□□□ -0.51
CWP1	YKL096W	YMR134W	P40207	237 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	CDC1	P40986	491 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	YNL320W	P42840	284 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	MCM6	P53091	1017 aa	Known RBP	11.89	□□□□□ -0.51
CWP1	YKL096W	UTP6	Q02354	440 aa	Known RBP	11.89	□□□□□ -0.51
CWP1	YKL096W	FMP25	Q08023	583 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	THI20	Q08224	551 aa		11.89	□□□□□ -0.51
CWP1	YKL096W	POL3	P15436	1097 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	RAD27	P26793	382 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	MEI4	P29467	408 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	NFU1	P32860	256 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	LAS1	P36146	502 aa	Predicted RBP	11.88	□□□□□ -0.51
CWP1	YKL096W	RGD1	P38339	666 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	NMD3	P38861	518 aa	Known RBP	11.88	□□□□□ -0.51
CWP1	YKL096W	MIC19	P43594	170 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	GUF1	P46943	645 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	VPS25	P47142	202 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	HEH2	Q03281	663 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	HRD3	Q05787	833 aa		11.88	□□□□□ -0.51
CWP1	YKL096W	RGR1	P19263	1082 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	DSS4	P32601	143 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	OLA1	P38219	394 aa	Known RBP	11.87	□□□□□ -0.51
CWP1	YKL096W	BFA1	P47113	574 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	CEG1	Q01159	459 aa	Predicted RBP	11.87	□□□□□ -0.51
CWP1	YKL096W	EAR1	Q03212	550 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	AIM32	Q04689	311 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	THI21	Q08975	551 aa		11.87	□□□□□ -0.51
CWP1	YKL096W	PEP5	P12868	1029 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	PGS1	P25578	521 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	YCR015C	P25616	317 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	11.86	□□□□□ -0.51	not detected
CWP1	YKL096W	ECM2	P38241	364 aa	Known RBP	11.86	□□□□□ -0.51
CWP1	YKL096W	FLC2	P39719	783 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	FAF1	P40546	346 aa	Predicted RBP	11.86	□□□□□ -0.51
CWP1	YKL096W	SAP185	P40856	1058 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	PEX31	P53203	462 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	AHC1	Q12433	566 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	IZH4	Q99393	312 aa		11.86	□□□□□ -0.51
CWP1	YKL096W	YML002W	P0CF17	737 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	MAS1	P10507	462 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	IDI1	P15496	288 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	SLY1	P22213	666 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	LTV1	P34078	463 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	TSA1	P34760	196 aa	Known RBP	11.85	□□□□□ -0.51
CWP1	YKL096W	VHC1	P38329	1120 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	YIR016W	P40572	265 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	HLJ1	P48353	224 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	RKM2	Q03942	479 aa		11.85	□□□□□ -0.51
CWP1	YKL096W	ECM22	Q05958	814 aa	Predicted RBP	11.85	□□□□□ -0.51
CWP1	YKL096W	CCP1	P00431	361 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	URK1	P27515	501 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	RIM4	P38741	713 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	SAW1	P39735	261 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	SAM3	Q08986	587 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	FAP7	Q12055	197 aa	Predicted RBP	11.84	□□□□□ -0.51
CWP1	YKL096W	MNL2	Q12205	849 aa		11.84	□□□□□ -0.51
CWP1	YKL096W	PLC1	P32383	869 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	HXT3	P32466	567 aa	Known RBP	11.83	□□□□□ -0.52
CWP1	YKL096W	MUD2	P36084	527 aa	Known RBP	11.83	□□□□□ -0.52
CWP1	YKL096W	YKR051W	P36142	418 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	SSP1	P38871	571 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	MKT1	P40850	830 aa	Known RBP	11.83	□□□□□ -0.52
CWP1	YKL096W	ALY2	P47029	1046 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	KTR6	P54070	446 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	HER2	Q03557	464 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	SND1	Q04007	877 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	SPG3	Q04398	127 aa	Predicted RBP	11.83	□□□□□ -0.52
CWP1	YKL096W	YDL073W	Q07454	984 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	ACM1	Q08981	209 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	LCB4	Q12246	624 aa		11.83	□□□□□ -0.52
CWP1	YKL096W	GCR1	P07261	785 aa		11.82	□□□□□ -0.52
CWP1	YKL096W	GPI10	P30777	616 aa		11.82	□□□□□ -0.52
CWP1	YKL096W	CDC27	P38042	758 aa		11.82	□□□□□ -0.52
CWP1	YKL096W	SPP381	P38282	291 aa	Predicted RBP	11.82	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms