RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C SSZ1P38788 538 aaKnown RBP2.03□□□□□ -2.08
VPS55YJR044C YHR202WP38887 602 aa2.03□□□□□ -2.08
VPS55YJR044C FLO5P38894 1075 aa2.03□□□□□ -2.08
VPS55YJR044C YAT2P40017 923 aa2.03□□□□□ -2.08
VPS55YJR044C IDP3P53982 420 aaKnown RBP2.03□□□□□ -2.08
VPS55YJR044C RCR2Q03446 210 aaKnown RBP2.03□□□□□ -2.08
VPS55YJR044C NDD1Q08887 554 aa2.03□□□□□ -2.08
VPS55YJR044C MDM12Q92328 271 aa2.03□□□□□ -2.08
VPS55YJR044C CIT2P08679 460 aa2.02□□□□□ -2.09
VPS55YJR044C STI1P15705 589 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VPS55YJR044C KIN82P25341 720 aa2.02□□□□□ -2.09
VPS55YJR044C HOG1P32485 435 aa2.02□□□□□ -2.09
VPS55YJR044C YKL091CP33324 310 aaKnown RBP2.02□□□□□ -2.09
VPS55YJR044C PIH1P38768 344 aa2.02□□□□□ -2.09
VPS55YJR044C DSS1P39112 969 aa2.02□□□□□ -2.09
VPS55YJR044C NUG1P40010 520 aaKnown RBP2.02□□□□□ -2.09
VPS55YJR044C TMN3P40071 706 aa2.02□□□□□ -2.09
VPS55YJR044C OPT1P40897 799 aa2.02□□□□□ -2.09
VPS55YJR044C VHS3Q08438 674 aa2.02□□□□□ -2.09
VPS55YJR044C YOR131CQ12486 218 aa2.02□□□□□ -2.09
VPS55YJR044C YLR111WQ12528 110 aa2.02□□□□□ -2.09
VPS55YJR044C YPR089WO13585 888 aa2.01□□□□□ -2.09
VPS55YJR044C SRD1P09007 221 aa2.01□□□□□ -2.09
VPS55YJR044C HMG1P12683 1054 aa2.01□□□□□ -2.09
VPS55YJR044C FRS1P15624 595 aaKnown RBP2.01□□□□□ -2.09
VPS55YJR044C IMG2P25642 146 aaPredicted RBP2.01□□□□□ -2.09
VPS55YJR044C PBP2P38151 413 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
VPS55YJR044C PPE1P38796 400 aa2.01□□□□□ -2.09
VPS55YJR044C NMD2P38798 1089 aaKnown RBP2.01□□□□□ -2.09
VPS55YJR044C EXO1P39875 702 aa2.01□□□□□ -2.09
VPS55YJR044C THI6P41835 540 aa2.01□□□□□ -2.09
VPS55YJR044C AIM14P53109 570 aa2.01□□□□□ -2.09
VPS55YJR044C YNL018CP53976 612 aa2.01□□□□□ -2.09
VPS55YJR044C TIM50Q02776 476 aa2.01□□□□□ -2.09
VPS55YJR044C MFM1Q02783 413 aa2.01□□□□□ -2.09
VPS55YJR044C BSP1Q06604 576 aa2.01□□□□□ -2.09
VPS55YJR044C YOL098CQ12496 1037 aa2.01□□□□□ -2.09
VPS55YJR044C YER190C-BP0CX94 160 aa2□□□□□ -2.09
VPS55YJR044C YEL077W-AP0CX95 160 aa2□□□□□ -2.09
VPS55YJR044C YGR296C-BP0CX96 160 aa2□□□□□ -2.09
VPS55YJR044C YPL283W-BP0CX97 160 aa2□□□□□ -2.09
VPS55YJR044C YPR204C-AP0CX98 160 aa2□□□□□ -2.09
VPS55YJR044C PET127P32606 800 aa2□□□□□ -2.09
VPS55YJR044C APD1P38281 316 aa2□□□□□ -2.09
VPS55YJR044C OCA5P38738 679 aa2□□□□□ -2.09
VPS55YJR044C YMR124WP39523 943 aaKnown RBP2□□□□□ -2.09
VPS55YJR044C OAF1P39720 1047 aaPredicted RBP2□□□□□ -2.09
VPS55YJR044C CHZ1P40019 153 aaPredicted RBP2□□□□□ -2.09
VPS55YJR044C DOT6P40059 670 aaKnown RBP2□□□□□ -2.09
VPS55YJR044C YIL024CP40543 189 aa2□□□□□ -2.09
VPS55YJR044C YFL015CP43578 164 aa2□□□□□ -2.09
VPS55YJR044C ATG36P46983 293 aa2□□□□□ -2.09
VPS55YJR044C YJR039WP47107 1121 aa2□□□□□ -2.09
VPS55YJR044C COQ6P53318 479 aa2□□□□□ -2.09
VPS55YJR044C VBA4Q04602 768 aaKnown RBP2□□□□□ -2.09
VPS55YJR044C YTH1Q06102 208 aaPredicted RBP2□□□□□ -2.09
VPS55YJR044C SNA4Q07549 140 aa2□□□□□ -2.09
VPS55YJR044C BUD7Q08754 746 aa2□□□□□ -2.09
VPS55YJR044C DCS2Q12123 353 aa2□□□□□ -2.09
VPS55YJR044C CNE1P27825 502 aa1.99□□□□□ -2.09
VPS55YJR044C MRPL7P36519 292 aa1.99□□□□□ -2.09
VPS55YJR044C DED81P38707 554 aaKnown RBP1.99□□□□□ -2.09
VPS55YJR044C FPR3P38911 411 aaKnown RBP1.99□□□□□ -2.09
VPS55YJR044C RNH70P53331 553 aa1.99□□□□□ -2.09
VPS55YJR044C BUD17P53727 317 aa1.99□□□□□ -2.09
VPS55YJR044C SCW10Q04951 389 aa1.99□□□□□ -2.09
VPS55YJR044C ATG33Q06485 197 aa1.99□□□□□ -2.09
VPS55YJR044C RDL1Q12305 139 aaKnown RBP1.99□□□□□ -2.09
VPS55YJR044C GSY1P23337 708 aa1.98□□□□□ -2.09
VPS55YJR044C GSY2P27472 705 aa1.98□□□□□ -2.09
VPS55YJR044C MGM1P32266 881 aa1.98□□□□□ -2.09
VPS55YJR044C PCM1P38628 557 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C NUP82P40368 713 aa1.98□□□□□ -2.09
VPS55YJR044C BUD6P41697 788 aa1.98□□□□□ -2.09
VPS55YJR044C ENP2P48234 707 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C LYS20P48570 428 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C DOS2P54858 310 aa1.98□□□□□ -2.09
VPS55YJR044C GPD1Q00055 391 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C RPN4Q03465 531 aa1.98□□□□□ -2.09
VPS55YJR044C EFR3Q03653 782 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C POB3Q04636 552 aaKnown RBP1.98□□□□□ -2.09
VPS55YJR044C WHI2P12611 486 aa1.97□□□□□ -2.09
VPS55YJR044C IME1P21190 360 aa1.97□□□□□ -2.09
VPS55YJR044C RNR3P21672 869 aaKnown RBP1.97□□□□□ -2.09
VPS55YJR044C YCP4P25349 247 aaKnown RBP1.97□□□□□ -2.09
VPS55YJR044C PCL2P25693 308 aa1.97□□□□□ -2.09
VPS55YJR044C MSH2P25847 964 aa1.97□□□□□ -2.09
VPS55YJR044C ATO2P32907 282 aa1.97□□□□□ -2.09
VPS55YJR044C YJR008WP47085 338 aa1.97□□□□□ -2.09
VPS55YJR044C YGR054WP53235 642 aaKnown RBP1.97□□□□□ -2.09
VPS55YJR044C RTS3P53289 263 aa1.97□□□□□ -2.09
VPS55YJR044C YPS7Q06325 596 aa1.97□□□□□ -2.09
VPS55YJR044C YDL073WQ07454 984 aa1.97□□□□□ -2.09
VPS55YJR044C SRL1Q08673 210 aa1.97□□□□□ -2.09
VPS55YJR044C YPL216WQ08964 1102 aa1.97□□□□□ -2.09
VPS55YJR044C YOR111WQ99210 232 aa1.97□□□□□ -2.09
VPS55YJR044C YMR084WA2P2R3 262 aa1.96□□□□□ -2.1
VPS55YJR044C TOP1P04786 769 aa1.96□□□□□ -2.1
VPS55YJR044C YKU70P32807 602 aa1.96□□□□□ -2.1
VPS55YJR044C PEX6P33760 1030 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms