RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W RIM4P38741 713 aa3.94□□□□□ -1.78
RPF1YHR088W YPL068CQ02749 293 aa3.94□□□□□ -1.78
RPF1YHR088W HLR1Q04429 423 aa3.94□□□□□ -1.78
RPF1YHR088W YDL073WQ07454 984 aa3.94□□□□□ -1.78
RPF1YHR088W GUD1Q07729 489 aa3.94□□□□□ -1.78
RPF1YHR088W TUP1P16649 713 aa3.93□□□□□ -1.78
RPF1YHR088W TSR4P25040 408 aa3.93□□□□□ -1.78
RPF1YHR088W YLR407WQ06070 228 aa3.93□□□□□ -1.78
RPF1YHR088W YLR001CQ07895 862 aa3.93□□□□□ -1.78
RPF1YHR088W NTG2Q08214 380 aa3.93□□□□□ -1.78
RPF1YHR088W LEU2P04173 364 aaPredicted RBP3.92□□□□□ -1.78
RPF1YHR088W RPL7AP05737 244 aaKnown RBP3.92□□□□□ -1.78
RPF1YHR088W BPL1P48445 690 aaPredicted RBP3.92□□□□□ -1.78
RPF1YHR088W CIR2Q08822 631 aa3.92□□□□□ -1.78
RPF1YHR088W RPL7BQ12213 244 aaKnown RBP3.92□□□□□ -1.78
RPF1YHR088W CPA2P03965 1118 aaKnown RBP3.91□□□□□ -1.78
RPF1YHR088W HEM1P09950 548 aaPredicted RBP3.91□□□□□ -1.78
RPF1YHR088W IME1P21190 360 aa3.91□□□□□ -1.78
RPF1YHR088W EUG1P32474 517 aa3.91□□□□□ -1.78
RPF1YHR088W BEM3P32873 1128 aa3.91□□□□□ -1.78
RPF1YHR088W RPC34P32910 317 aa3.91□□□□□ -1.78
RPF1YHR088W RET2P43621 546 aa3.91□□□□□ -1.78
RPF1YHR088W PIP2P52960 996 aa3.91□□□□□ -1.78
RPF1YHR088W MET13P53128 600 aa3.91□□□□□ -1.78
RPF1YHR088W NSE5Q03718 556 aa3.91□□□□□ -1.78
RPF1YHR088W GFD1Q04839 188 aaKnown RBP3.91□□□□□ -1.78
RPF1YHR088W SWI6P09959 803 aa3.9□□□□□ -1.79
RPF1YHR088W WHI2P12611 486 aa3.9□□□□□ -1.79
RPF1YHR088W DHR2P36009 735 aaPredicted RBP3.9□□□□□ -1.79
RPF1YHR088W SPC97P38863 823 aa3.9□□□□□ -1.79
RPF1YHR088W BUD8P41698 603 aa3.9□□□□□ -1.79
RPF1YHR088W NMD5P46970 1048 aa3.9□□□□□ -1.79
RPF1YHR088W COQ6P53318 479 aa3.9□□□□□ -1.79
RPF1YHR088W ATP23P53722 227 aa3.9□□□□□ -1.79
RPF1YHR088W YNL193WP53870 558 aa3.9□□□□□ -1.79
RPF1YHR088W ERG13P54839 491 aaKnown RBP3.9□□□□□ -1.79
RPF1YHR088W RCR2Q03446 210 aaKnown RBP3.9□□□□□ -1.79
RPF1YHR088W TRS23Q03784 219 aa3.9□□□□□ -1.79
RPF1YHR088W YPL216WQ08964 1102 aa3.9□□□□□ -1.79
RPF1YHR088W TGS1Q12052 315 aa3.9□□□□□ -1.79
RPF1YHR088W CNE1P27825 502 aa3.89□□□□□ -1.79
RPF1YHR088W MRPL9P31334 269 aa3.89□□□□□ -1.79
RPF1YHR088W LOT5P34234 306 aa3.89□□□□□ -1.79
RPF1YHR088W PPE1P38796 400 aa3.89□□□□□ -1.79
RPF1YHR088W TMN3P40071 706 aa3.89□□□□□ -1.79
RPF1YHR088W MGS1P40151 587 aa3.89□□□□□ -1.79
RPF1YHR088W SNO3P43544 222 aa3.89□□□□□ -1.79
RPF1YHR088W YIP4P53093 235 aa3.89□□□□□ -1.79
RPF1YHR088W EFR3Q03653 782 aaKnown RBP3.89□□□□□ -1.79
RPF1YHR088W PRE4P30657 266 aa3.88□□□□□ -1.79
RPF1YHR088W TDA3P38758 523 aa3.88□□□□□ -1.79
RPF1YHR088W OPT1P40897 799 aa3.88□□□□□ -1.79
RPF1YHR088W YNL018CP53976 612 aa3.88□□□□□ -1.79
RPF1YHR088W MFM1Q02783 413 aa3.88□□□□□ -1.79
RPF1YHR088W YPS7Q06325 596 aa3.88□□□□□ -1.79
RPF1YHR088W GEP3Q08622 556 aa3.88□□□□□ -1.79
RPF1YHR088W RPS17AP02407 136 aaKnown RBP3.87□□□□□ -1.79
RPF1YHR088W RPS17BP14127 136 aaKnown RBP3.87□□□□□ -1.79
RPF1YHR088W CAP1P28495 268 aaKnown RBP3.87□□□□□ -1.79
RPF1YHR088W MRPL7P36519 292 aa3.87□□□□□ -1.79
RPF1YHR088W TAF4P50105 388 aa3.87□□□□□ -1.79
RPF1YHR088W TFB2Q02939 513 aa3.87□□□□□ -1.79
RPF1YHR088W FPR4Q06205 392 aaPredicted RBP3.87□□□□□ -1.79
RPF1YHR088W STP4Q07351 490 aa3.87□□□□□ -1.79
RPF1YHR088W HOP1P20050 605 aa3.86□□□□□ -1.79
RPF1YHR088W ECM32P32644 1121 aaKnown RBP3.86□□□□□ -1.79
RPF1YHR088W CKB2P38930 258 aa3.86□□□□□ -1.79
RPF1YHR088W YEL025CP39991 1188 aa3.86□□□□□ -1.79
RPF1YHR088W IRC8P47046 822 aa3.86□□□□□ -1.79
RPF1YHR088W YGR054WP53235 642 aaKnown RBP3.86□□□□□ -1.79
RPF1YHR088W BUD17P53727 317 aa3.86□□□□□ -1.79
RPF1YHR088W NOP15P53927 220 aaPredicted RBP3.86□□□□□ -1.79
RPF1YHR088W AIM41Q12032 185 aa3.86□□□□□ -1.79
RPF1YHR088W TUF1P02992 437 aaKnown RBP3.85□□□□□ -1.79
RPF1YHR088W GSY2P27472 705 aa3.85□□□□□ -1.79
RPF1YHR088W BRN1P38170 754 aa3.85□□□□□ -1.79
RPF1YHR088W CRG1P38892 291 aaRIP-Chip data3.85□□□□□ -1.79not detected
RPF1YHR088W FTR1P40088 404 aa3.85□□□□□ -1.79
RPF1YHR088W MNT3P40549 630 aa3.85□□□□□ -1.79
RPF1YHR088W ENP2P48234 707 aaKnown RBP3.85□□□□□ -1.79
RPF1YHR088W SFP1P32432 683 aa3.84□□□□□ -1.79
RPF1YHR088W DUN1P39009 513 aa3.84□□□□□ -1.79
RPF1YHR088W PCI8P40512 444 aa3.84□□□□□ -1.79
RPF1YHR088W IES1P43579 692 aa3.84□□□□□ -1.79
RPF1YHR088W SDA1P53313 767 aaKnown RBP3.84□□□□□ -1.79
RPF1YHR088W IDP3P53982 420 aaKnown RBP3.84□□□□□ -1.79
RPF1YHR088W RPS15Q01855 142 aaKnown RBP3.84□□□□□ -1.79
RPF1YHR088W TDA9Q04545 1251 aa3.84□□□□□ -1.79
RPF1YHR088W BSP1Q06604 576 aa3.84□□□□□ -1.79
RPF1YHR088W RRP14P36080 434 aaKnown RBP3.83□□□□□ -1.8
RPF1YHR088W EXO1P39875 702 aa3.83□□□□□ -1.8
RPF1YHR088W JHD1P40034 492 aa3.83□□□□□ -1.8
RPF1YHR088W PRM2P40534 656 aa3.83□□□□□ -1.8
RPF1YHR088W MEP2P41948 499 aa3.83□□□□□ -1.8
RPF1YHR088W YJL043WP47053 257 aa3.83□□□□□ -1.8
RPF1YHR088W FRE7Q12333 620 aa3.83□□□□□ -1.8
RPF1YHR088W AQY1P0CD91 305 aa3.82□□□□□ -1.8
RPF1YHR088W ACO1P19414 778 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
RPF1YHR088W RGT1P32862 1170 aa3.82□□□□□ -1.8
RPF1YHR088W ASK1P35734 292 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms