RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C HFD1Q04458 532 aa3.88□□□□□ -1.79
SLX9YGR081C UFO1Q04511 668 aa3.88□□□□□ -1.79
SLX9YGR081C FAP7Q12055 197 aaPredicted RBP3.88□□□□□ -1.79
SLX9YGR081C TUP1P16649 713 aa3.87□□□□□ -1.79
SLX9YGR081C DID4P36108 232 aa3.87□□□□□ -1.79
SLX9YGR081C APL3P38065 1025 aa3.87□□□□□ -1.79
SLX9YGR081C CRG1P38892 291 aaRIP-Chip data3.87□□□□□ -1.79not detected
SLX9YGR081C PAC2P39937 518 aa3.87□□□□□ -1.79
SLX9YGR081C DIP5P53388 608 aa3.87□□□□□ -1.79
SLX9YGR081C PTA1Q01329 785 aaPredicted RBP3.87□□□□□ -1.79
SLX9YGR081C TIM50Q02776 476 aa3.87□□□□□ -1.79
SLX9YGR081C FDC1Q03034 503 aa3.87□□□□□ -1.79
SLX9YGR081C YDR179W-AQ03983 463 aa3.87□□□□□ -1.79
SLX9YGR081C SPA2P23201 1466 aaKnown RBP3.86□□□□□ -1.79
SLX9YGR081C STE12P13574 688 aa3.86□□□□□ -1.79
SLX9YGR081C ACO1P19414 778 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SLX9YGR081C MTC7P32633 139 aa3.86□□□□□ -1.79
SLX9YGR081C CDS1P38221 457 aa3.86□□□□□ -1.79
SLX9YGR081C TMN3P40071 706 aa3.86□□□□□ -1.79
SLX9YGR081C FTR1P40088 404 aa3.86□□□□□ -1.79
SLX9YGR081C PRM2P40534 656 aa3.86□□□□□ -1.79
SLX9YGR081C ASN1P49089 572 aaKnown RBP3.86□□□□□ -1.79
SLX9YGR081C HLR1Q04429 423 aa3.86□□□□□ -1.79
SLX9YGR081C COQ11Q05892 277 aa3.86□□□□□ -1.79
SLX9YGR081C TPK2P06245 380 aa3.85□□□□□ -1.79
SLX9YGR081C STE4P18851 423 aa3.85□□□□□ -1.79
SLX9YGR081C MF(ALPHA)2P32435 120 aa3.85□□□□□ -1.79
SLX9YGR081C SER1P33330 395 aaKnown RBP3.85□□□□□ -1.79
SLX9YGR081C BRN1P38170 754 aa3.85□□□□□ -1.79
SLX9YGR081C UBP12P39538 1254 aa3.85□□□□□ -1.79
SLX9YGR081C YNL162W-AQ3E7A8 72 aa3.85□□□□□ -1.79
SLX9YGR081C MRPL7P36519 292 aa3.84□□□□□ -1.79
SLX9YGR081C PMC1P38929 1173 aaPredicted RBP3.84□□□□□ -1.79
SLX9YGR081C YGL081WP53156 320 aa3.84□□□□□ -1.79
SLX9YGR081C MDM20Q12387 796 aaKnown RBP3.84□□□□□ -1.79
SLX9YGR081C SAT4P25333 603 aaKnown RBP3.83□□□□□ -1.8
SLX9YGR081C DAL3P32459 195 aa3.83□□□□□ -1.8
SLX9YGR081C HXT4P32467 576 aa3.83□□□□□ -1.8
SLX9YGR081C YDL183CP48569 320 aa3.83□□□□□ -1.8
SLX9YGR081C YGR054WP53235 642 aaKnown RBP3.83□□□□□ -1.8
SLX9YGR081C NGL2Q03264 515 aaKnown RBP3.83□□□□□ -1.8
SLX9YGR081C TRS23Q03784 219 aa3.83□□□□□ -1.8
SLX9YGR081C OSW1Q08692 278 aa3.83□□□□□ -1.8
SLX9YGR081C LEU2P04173 364 aaPredicted RBP3.82□□□□□ -1.8
SLX9YGR081C HMG2P12684 1045 aa3.82□□□□□ -1.8
SLX9YGR081C YMC1P32331 307 aa3.82□□□□□ -1.8
SLX9YGR081C UGP1P32861 499 aaKnown RBP3.82□□□□□ -1.8
SLX9YGR081C YHR033WP38690 423 aa3.82□□□□□ -1.8
SLX9YGR081C ENP2P48234 707 aaKnown RBP3.82□□□□□ -1.8
SLX9YGR081C RNR4P49723 345 aaKnown RBP3.82□□□□□ -1.8
SLX9YGR081C MRI1Q06489 411 aaKnown RBP3.82□□□□□ -1.8
SLX9YGR081C YCG1Q06680 1035 aa3.82□□□□□ -1.8
SLX9YGR081C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SLX9YGR081C ATP12P22135 325 aa3.81□□□□□ -1.8
SLX9YGR081C RPA135P22138 1203 aaKnown RBP3.81□□□□□ -1.8
SLX9YGR081C VPS34P22543 875 aa3.81□□□□□ -1.8
SLX9YGR081C EHT1P38295 451 aa3.81□□□□□ -1.8
SLX9YGR081C PPE1P38796 400 aa3.81□□□□□ -1.8
SLX9YGR081C GPP2P40106 250 aaKnown RBP3.81□□□□□ -1.8
SLX9YGR081C DUG1P43616 481 aaKnown RBP3.81□□□□□ -1.8
SLX9YGR081C YIP4P53093 235 aa3.81□□□□□ -1.8
SLX9YGR081C YGL117WP53133 265 aa3.81□□□□□ -1.8
SLX9YGR081C DAK1P54838 584 aaKnown RBP3.81□□□□□ -1.8
SLX9YGR081C EFR3Q03653 782 aaKnown RBP3.81□□□□□ -1.8
SLX9YGR081C THI7Q05998 598 aa3.81□□□□□ -1.8
SLX9YGR081C ULA1Q12059 462 aa3.81□□□□□ -1.8
SLX9YGR081C YPR027CQ12079 277 aa3.81□□□□□ -1.8
SLX9YGR081C DNA2P38859 1522 aa3.8□□□□□ -1.8
SLX9YGR081C HOP1P20050 605 aa3.8□□□□□ -1.8
SLX9YGR081C YEN1P40028 759 aa3.8□□□□□ -1.8
SLX9YGR081C NIT2P47016 307 aa3.8□□□□□ -1.8
SLX9YGR081C CPR8P53728 308 aa3.8□□□□□ -1.8
SLX9YGR081C RPS15Q01855 142 aaKnown RBP3.8□□□□□ -1.8
SLX9YGR081C FMP30Q02883 468 aa3.8□□□□□ -1.8
SLX9YGR081C CEF1Q03654 590 aaPredicted RBP3.8□□□□□ -1.8
SLX9YGR081C SKY1Q03656 742 aa3.8□□□□□ -1.8
SLX9YGR081C ARG7Q04728 441 aa3.8□□□□□ -1.8
SLX9YGR081C AIM41Q12032 185 aa3.8□□□□□ -1.8
SLX9YGR081C RMP1Q12530 201 aa3.8□□□□□ -1.8
SLX9YGR081C ADE5,7P07244 802 aaKnown RBP3.79□□□□□ -1.8
SLX9YGR081C HOM2P13663 365 aaKnown RBP3.79□□□□□ -1.8
SLX9YGR081C EUG1P32474 517 aa3.79□□□□□ -1.8
SLX9YGR081C GRX4P32642 244 aa3.79□□□□□ -1.8
SLX9YGR081C ORC2P32833 620 aa3.79□□□□□ -1.8
SLX9YGR081C LRO1P40345 661 aa3.79□□□□□ -1.8
SLX9YGR081C MFM1Q02783 413 aa3.79□□□□□ -1.8
SLX9YGR081C ARR3Q06598 404 aa3.79□□□□□ -1.8
SLX9YGR081C NGL1Q08213 363 aaKnown RBP3.79□□□□□ -1.8
SLX9YGR081C MDM10P18409 493 aa3.78□□□□□ -1.8
SLX9YGR081C DGR2P32330 852 aa3.78□□□□□ -1.8
SLX9YGR081C DHR2P36009 735 aaPredicted RBP3.78□□□□□ -1.8
SLX9YGR081C YEL025CP39991 1188 aa3.78□□□□□ -1.8
SLX9YGR081C THI6P41835 540 aa3.78□□□□□ -1.8
SLX9YGR081C IRC5P43610 853 aa3.78□□□□□ -1.8
SLX9YGR081C PEF1P53238 335 aa3.78□□□□□ -1.8
SLX9YGR081C BUD17P53727 317 aa3.78□□□□□ -1.8
SLX9YGR081C AEP2P22136 580 aa3.77□□□□□ -1.81
SLX9YGR081C CNE1P27825 502 aa3.77□□□□□ -1.81
SLX9YGR081C RMA1P36001 430 aaKnown RBP3.77□□□□□ -1.81
SLX9YGR081C RIM4P38741 713 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms