RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	OPY2	Q06810	360 aa		4.8	□□□□□ -1.64
TFB3	YDR460W	AVO1	Q08236	1176 aa		4.8	□□□□□ -1.64
TFB3	YDR460W	YOR352W	Q08816	343 aa		4.8	□□□□□ -1.64
TFB3	YDR460W	UIP4	Q08926	304 aa		4.8	□□□□□ -1.64
TFB3	YDR460W	DED1	P06634	604 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	RPS19A	P07280	144 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	RPS19B	P07281	144 aa	Predicted RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	RSR1	P13856	272 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	SNA3	P14359	133 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	KSS1	P14681	368 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	GRX4	P32642	244 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	ECM32	P32644	1121 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	RSM22	P36056	628 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	PSY4	P38193	441 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	PCF11	P39081	626 aa	Predicted RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	PIK1	P39104	1066 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	SCS2	P40075	244 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	SER33	P40510	469 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	MIC19	P43594	170 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	HFM1	P51979	1187 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	YGR045C	P53229	120 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	NCE103	P53615	221 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	ADA2	Q02336	434 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	EEB1	Q02891	456 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	WAR1	Q03631	944 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	GIR2	Q03768	265 aa	Predicted RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	RKM2	Q03942	479 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	TSR2	Q06672	205 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	YPL150W	Q12152	901 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	HTZ1	Q12692	134 aa	Known RBP	4.79	□□□□□ -1.64
TFB3	YDR460W	SEY1	Q99287	776 aa		4.79	□□□□□ -1.64
TFB3	YDR460W	AI3	P03877	415 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	KAR1	P11927	433 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	PGI1	P12709	554 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	FRS2	P15625	503 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	CKI1	P20485	582 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	IME1	P21190	360 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	DPB2	P24482	689 aa	Predicted RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	GSY2	P27472	705 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	STE13	P33894	931 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	STO1	P34160	861 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	UTP11	P34247	250 aa	Predicted RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	RER2	P35196	286 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	YHL012W	P38709	493 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	YAR028W	P39548	234 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	TIF4631	P39935	952 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	MAM1	P40065	302 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	CAB2	P40506	365 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	PRY1	P47032	299 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	NNF1	P47149	201 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	LIF1	P53150	421 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	YGR054W	P53235	642 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	DIP5	P53388	608 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	YNR063W	P53749	607 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	PTA1	Q01329	785 aa	Predicted RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	CWC21	Q03375	135 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	FIN1	Q03898	291 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	DOT1	Q04089	582 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	RSC3	Q06639	885 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	NOP12	Q08208	459 aa	Known RBP	4.78	□□□□□ -1.64
TFB3	YDR460W	SDH5	Q08230	162 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	CIR2	Q08822	631 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	TRM8	Q12009	286 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	DCS2	Q12123	353 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	GET4	Q12125	312 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	PHM7	Q12252	991 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	CEX1	Q12453	761 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	RKM4	Q12504	494 aa		4.78	□□□□□ -1.64
TFB3	YDR460W	FAS2	P19097	1887 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	URA4	P20051	364 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	PWP1	P21304	576 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	GRX1	P25373	110 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	RSC6	P25632	483 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	MKK2	P32491	506 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	AFG2	P32794	780 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	BMH2	P34730	273 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	UBP13	P38187	747 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	SPP381	P38282	291 aa	Predicted RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	SLX1	P38324	304 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	TIF5	P38431	405 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	REV7	P38927	245 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	ESL1	P40456	1118 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	SNL1	P40548	159 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	ALG2	P43636	503 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	FYV8	P46949	817 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	TMA22	P47089	198 aa	Predicted RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	FMS1	P50264	508 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	ALT1	P52893	592 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	RBG2	P53295	368 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	YGR266W	P53326	701 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	ELA1	P53861	379 aa	Predicted RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	SFB2	P53953	876 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	HOT1	Q03213	719 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	YMR187C	Q03236	431 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	RVB1	Q03940	463 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	RRP17	Q04031	235 aa	Predicted RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	GFD1	Q04839	188 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	ATG13	Q06628	738 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	MDM36	Q06820	579 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	CLP1	Q08685	445 aa	Predicted RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms