RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	RKM3	P38222	552 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	UBS1	P38290	277 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	ENP2	P48234	707 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	PEF1	P53238	335 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	RBG2	P53295	368 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	TIM10	P87108	93 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	UPC2	Q12151	913 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	URA3	P03962	267 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	GAL10	P04397	699 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	MIS1	P09440	975 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	TUB3	P09734	445 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	RIT1	P23796	513 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	ERG6	P25087	383 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	PRE4	P30657	266 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	PET127	P32606	800 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	BLI1	P35727	113 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	DHR2	P36009	735 aa	Predicted RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	TAF5	P38129	798 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	CDS1	P38221	457 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	YHR112C	P38716	378 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	SSP120	P39931	234 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	RIC1	P40395	1056 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	CTF18	P49956	741 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	RSC1	P53236	928 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	ASI2	P53895	289 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	ARG5,6	Q01217	863 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	CDA2	Q06703	312 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	PCD1	Q12524	340 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	VPS5	Q92331	675 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	CDC16	P09798	840 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	BET2	P20133	325 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	CBF2	P32504	956 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	FRD1	P32614	470 aa	Known RBP	3.16	□□□□□ -1.9
TFB1	YDR311W	ATG19	P35193	415 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	NUP120	P35729	1037 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	URM1	P40554	99 aa	Predicted RBP	3.16	□□□□□ -1.9
TFB1	YDR311W	LYS14	P40971	790 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	PXA1	P41909	870 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	SGM1	P47166	707 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	YBP2	P53169	641 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	GTF1	P53260	183 aa	Predicted RBP	3.16	□□□□□ -1.9
TFB1	YDR311W	PLB2	Q03674	706 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	TAF11	Q04226	346 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	SNO4	Q04902	237 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	TRI1	Q05024	226 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	CSR1	Q06705	408 aa	Known RBP	3.16	□□□□□ -1.9
TFB1	YDR311W	TPO1	Q07824	586 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	HSP33	Q08914	237 aa	Known RBP	3.16	□□□□□ -1.9
TFB1	YDR311W	HSP32	Q08992	237 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	HOS1	Q12214	470 aa		3.16	□□□□□ -1.9
TFB1	YDR311W	FUM1	P08417	488 aa	Known RBP	3.15	□□□□□ -1.9
TFB1	YDR311W	MRP7	P12687	371 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	SED4	P25365	1065 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	CWH43	P25618	953 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	SEC21	P32074	935 aa	Known RBP	3.15	□□□□□ -1.9
TFB1	YDR311W	YLF2	P38746	405 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	TPA1	P40032	644 aa	Known RBP	3.15	□□□□□ -1.9
TFB1	YDR311W	PRM2	P40534	656 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	BIT61	P47041	543 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	YDL183C	P48569	320 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	NSE5	Q03718	556 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	YKU80	Q04437	629 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	ADY3	Q07732	790 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	AAD4	Q07747	329 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	GRC3	Q07845	632 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	SGO1	Q08490	590 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	ICL2	Q12031	575 aa		3.15	□□□□□ -1.9
TFB1	YDR311W	SPO16	P17122	198 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	RNR1	P21524	888 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	GAS1	P22146	559 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	CMK1	P27466	446 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	RPT3	P33298	428 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	THI80	P35202	319 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	ESL2	P36168	1195 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	SAP4	P53036	818 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	COX18	P53239	316 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	MRPS35	P53292	345 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	ARE2	P53629	642 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	SQS1	P53866	767 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	REC102	Q02721	264 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	SLU7	Q02775	382 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	PKH1	Q03407	766 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	ROT1	Q03691	256 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	SPC19	Q03954	165 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	HMO1	Q03973	246 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	VBA4	Q04602	768 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	GSF2	Q04697	403 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	TAH18	Q12181	623 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	YDL177C	Q12257	170 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	RVB2	Q12464	471 aa	Known RBP	3.15	□□□□□ -1.91
TFB1	YDR311W	ECM3	Q99252	613 aa		3.15	□□□□□ -1.91
TFB1	YDR311W	YLR415C	O13578	112 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	HMG2	P12684	1045 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	OPI1	P21957	404 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	TFC3	P34111	1160 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	CRG1	P38892	291 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
TFB1	YDR311W	UME6	P39001	836 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	GSM1	P42950	618 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	POL31	P46957	487 aa		3.14	□□□□□ -1.91
TFB1	YDR311W	NOP9	P47077	666 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms