RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C PMA2P19657 947 aa2.74□□□□□ -1.97
PCF11YDR228C APN1P22936 367 aa2.74□□□□□ -1.97
PCF11YDR228C CRG1P38892 291 aaRIP-Chip data2.74□□□□□ -1.97not detected
PCF11YDR228C NOP15P53927 220 aaPredicted RBP2.74□□□□□ -1.97
PCF11YDR228C NSE5Q03718 556 aa2.74□□□□□ -1.97
PCF11YDR228C PPN1Q04119 674 aa2.74□□□□□ -1.97
PCF11YDR228C RPS17AP02407 136 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C RPS17BP14127 136 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C AAD3P25612 363 aa2.73□□□□□ -1.97
PCF11YDR228C HOT13P36078 116 aa2.73□□□□□ -1.97
PCF11YDR228C TDA3P38758 523 aa2.73□□□□□ -1.97
PCF11YDR228C SDA1P53313 767 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C RNH70P53331 553 aa2.73□□□□□ -1.97
PCF11YDR228C SEC5P89102 971 aa2.73□□□□□ -1.97
PCF11YDR228C APM4Q99186 491 aa2.73□□□□□ -1.97
PCF11YDR228C AI5_ALPHAQ9ZZX1 630 aa2.73□□□□□ -1.97
PCF11YDR228C MTC7P32633 139 aa2.73□□□□□ -1.97
PCF11YDR228C MRPL7P36519 292 aa2.73□□□□□ -1.97
PCF11YDR228C TMN3P40071 706 aa2.73□□□□□ -1.97
PCF11YDR228C FTR1P40088 404 aa2.73□□□□□ -1.97
PCF11YDR228C GAT1P43574 510 aa2.73□□□□□ -1.97
PCF11YDR228C NET1P47035 1189 aa2.73□□□□□ -1.97
PCF11YDR228C YGR054WP53235 642 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C YNL018CP53976 612 aa2.73□□□□□ -1.97
PCF11YDR228C ECM9Q02202 377 aa2.73□□□□□ -1.97
PCF11YDR228C EFR3Q03653 782 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C RPS21BQ3E754 87 aaKnown RBP2.73□□□□□ -1.97
PCF11YDR228C NUP1P20676 1076 aa2.72□□□□□ -1.97
PCF11YDR228C PTP1P25044 335 aa2.72□□□□□ -1.97
PCF11YDR228C CNE1P27825 502 aa2.72□□□□□ -1.97
PCF11YDR228C MF(ALPHA)2P32435 120 aa2.72□□□□□ -1.97
PCF11YDR228C XBP1P40489 647 aa2.72□□□□□ -1.97
PCF11YDR228C THI6P41835 540 aa2.72□□□□□ -1.97
PCF11YDR228C TAF4P50105 388 aa2.72□□□□□ -1.97
PCF11YDR228C DNM1P54861 757 aa2.72□□□□□ -1.97
PCF11YDR228C RPS15Q01855 142 aaKnown RBP2.72□□□□□ -1.97
PCF11YDR228C CEF1Q03654 590 aaPredicted RBP2.72□□□□□ -1.97
PCF11YDR228C HFI1Q12060 488 aa2.72□□□□□ -1.97
PCF11YDR228C ZPS1Q12512 249 aa2.72□□□□□ -1.97
PCF11YDR228C RPL7AP05737 244 aaKnown RBP2.71□□□□□ -1.98
PCF11YDR228C ACO1P19414 778 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PCF11YDR228C MNN1P39106 762 aa2.71□□□□□ -1.98
PCF11YDR228C PRM2P40534 656 aa2.71□□□□□ -1.98
PCF11YDR228C BFA1P47113 574 aa2.71□□□□□ -1.98
PCF11YDR228C YIP4P53093 235 aa2.71□□□□□ -1.98
PCF11YDR228C RPL7BQ12213 244 aaKnown RBP2.71□□□□□ -1.98
PCF11YDR228C CPA2P03965 1118 aaKnown RBP2.71□□□□□ -1.98
PCF11YDR228C CDC26P14724 124 aa2.71□□□□□ -1.98
PCF11YDR228C TUP1P16649 713 aa2.71□□□□□ -1.98
PCF11YDR228C HOP1P20050 605 aa2.71□□□□□ -1.98
PCF11YDR228C SEC65P29478 273 aa2.71□□□□□ -1.98
PCF11YDR228C SFP1P32432 683 aa2.71□□□□□ -1.98
PCF11YDR228C OAF3P36023 863 aa2.71□□□□□ -1.98
PCF11YDR228C ULP2P40537 1034 aaPredicted RBP2.71□□□□□ -1.98
PCF11YDR228C GZF3P42944 551 aaKnown RBP2.71□□□□□ -1.98
PCF11YDR228C YDL183CP48569 320 aa2.71□□□□□ -1.98
PCF11YDR228C TIM50Q02776 476 aa2.71□□□□□ -1.98
PCF11YDR228C TRS23Q03784 219 aa2.71□□□□□ -1.98
PCF11YDR228C MTQ2Q03920 221 aaPredicted RBP2.71□□□□□ -1.98
PCF11YDR228C ARR3Q06598 404 aa2.71□□□□□ -1.98
PCF11YDR228C PRP19P32523 503 aaKnown RBP2.7□□□□□ -1.98
PCF11YDR228C FAT1P38225 669 aa2.7□□□□□ -1.98
PCF11YDR228C PIH1P38768 344 aa2.7□□□□□ -1.98
PCF11YDR228C PPE1P38796 400 aa2.7□□□□□ -1.98
PCF11YDR228C COQ6P53318 479 aa2.7□□□□□ -1.98
PCF11YDR228C BUD17P53727 317 aa2.7□□□□□ -1.98
PCF11YDR228C USA1Q03714 838 aa2.7□□□□□ -1.98
PCF11YDR228C THI73Q07904 523 aa2.7□□□□□ -1.98
PCF11YDR228C CIR2Q08822 631 aa2.7□□□□□ -1.98
PCF11YDR228C RGT2Q12300 763 aa2.7□□□□□ -1.98
PCF11YDR228C FRE7Q12333 620 aa2.7□□□□□ -1.98
PCF11YDR228C GLN4P13188 809 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
PCF11YDR228C YPT10P38146 199 aa2.69□□□□□ -1.98
PCF11YDR228C YGR153WP48238 217 aa2.69□□□□□ -1.98
PCF11YDR228C UTP14Q04500 899 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C YDL073WQ07454 984 aa2.69□□□□□ -1.98
PCF11YDR228C RPS21AP0C0V8 87 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C WHI2P12611 486 aa2.69□□□□□ -1.98
PCF11YDR228C ECM32P32644 1121 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C TYS1P36421 394 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C DUN1P39009 513 aa2.69□□□□□ -1.98
PCF11YDR228C OAF1P39720 1047 aaPredicted RBP2.69□□□□□ -1.98
PCF11YDR228C LRO1P40345 661 aa2.69□□□□□ -1.98
PCF11YDR228C MNN11P46985 422 aaKnown RBP2.69□□□□□ -1.98
PCF11YDR228C GPG1P53130 126 aa2.69□□□□□ -1.98
PCF11YDR228C YPL068CQ02749 293 aa2.69□□□□□ -1.98
PCF11YDR228C ADR1P07248 1323 aa2.68□□□□□ -1.98
PCF11YDR228C YMR084WA2P2R3 262 aa2.68□□□□□ -1.98
PCF11YDR228C CAP1P28495 268 aaKnown RBP2.68□□□□□ -1.98
PCF11YDR228C PPG1P32838 368 aa2.68□□□□□ -1.98
PCF11YDR228C RIM4P38741 713 aa2.68□□□□□ -1.98
PCF11YDR228C NMD2P38798 1089 aaKnown RBP2.68□□□□□ -1.98
PCF11YDR228C EXO1P39875 702 aa2.68□□□□□ -1.98
PCF11YDR228C BST1P43571 1029 aa2.68□□□□□ -1.98
PCF11YDR228C NMD5P46970 1048 aa2.68□□□□□ -1.98
PCF11YDR228C SAP4P53036 818 aa2.68□□□□□ -1.98
PCF11YDR228C MFM1Q02783 413 aa2.68□□□□□ -1.98
PCF11YDR228C IRC3Q06683 689 aa2.68□□□□□ -1.98
PCF11YDR228C YTM1Q12024 460 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms