RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	SPO1	P53541	631 aa		2.57	□□□□□ -2
CSN9	YDR179C	YPL068C	Q02749	293 aa		2.57	□□□□□ -2
CSN9	YDR179C	FDC1	Q03034	503 aa		2.57	□□□□□ -2
CSN9	YDR179C	GFD1	Q04839	188 aa	Known RBP	2.57	□□□□□ -2
CSN9	YDR179C	HEM1	P09950	548 aa	Predicted RBP	2.56	□□□□□ -2
CSN9	YDR179C	STE4	P18851	423 aa		2.56	□□□□□ -2
CSN9	YDR179C	MRPL9	P31334	269 aa		2.56	□□□□□ -2
CSN9	YDR179C	BEM3	P32873	1128 aa		2.56	□□□□□ -2
CSN9	YDR179C	NUG1	P40010	520 aa	Known RBP	2.56	□□□□□ -2
CSN9	YDR179C	SNO3	P43544	222 aa		2.56	□□□□□ -2
CSN9	YDR179C	BPL1	P48445	690 aa	Predicted RBP	2.56	□□□□□ -2
CSN9	YDR179C	ATP23	P53722	227 aa		2.56	□□□□□ -2
CSN9	YDR179C	ERG13	P54839	491 aa	Known RBP	2.56	□□□□□ -2
CSN9	YDR179C	GUD1	Q07729	489 aa		2.56	□□□□□ -2
CSN9	YDR179C	RPL7A	P05737	244 aa	Known RBP	2.55	□□□□□ -2
CSN9	YDR179C	WHI2	P12611	486 aa		2.55	□□□□□ -2
CSN9	YDR179C	YKU70	P32807	602 aa		2.55	□□□□□ -2
CSN9	YDR179C	RPC34	P32910	317 aa		2.55	□□□□□ -2
CSN9	YDR179C	LOT5	P34234	306 aa		2.55	□□□□□ -2
CSN9	YDR179C	DHR2	P36009	735 aa	Predicted RBP	2.55	□□□□□ -2
CSN9	YDR179C	NMD5	P46970	1048 aa		2.55	□□□□□ -2
CSN9	YDR179C	TRS23	Q03784	219 aa		2.55	□□□□□ -2
CSN9	YDR179C	HLR1	Q04429	423 aa		2.55	□□□□□ -2
CSN9	YDR179C	CIR2	Q08822	631 aa		2.55	□□□□□ -2
CSN9	YDR179C	YPL216W	Q08964	1102 aa		2.55	□□□□□ -2
CSN9	YDR179C	TGS1	Q12052	315 aa		2.55	□□□□□ -2
CSN9	YDR179C	RPL7B	Q12213	244 aa	Known RBP	2.55	□□□□□ -2
CSN9	YDR179C	CPA2	P03965	1118 aa	Known RBP	2.54	□□□□□ -2
CSN9	YDR179C	OCA5	P38738	679 aa		2.54	□□□□□ -2
CSN9	YDR179C	OPT1	P40897	799 aa		2.54	□□□□□ -2
CSN9	YDR179C	PIP2	P52960	996 aa		2.54	□□□□□ -2
CSN9	YDR179C	COQ6	P53318	479 aa		2.54	□□□□□ -2
CSN9	YDR179C	NSE5	Q03718	556 aa		2.54	□□□□□ -2
CSN9	YDR179C	YLR407W	Q06070	228 aa		2.54	□□□□□ -2
CSN9	YDR179C	LEU2	P04173	364 aa	Predicted RBP	2.53	□□□□□ -2
CSN9	YDR179C	TDA3	P38758	523 aa		2.53	□□□□□ -2
CSN9	YDR179C	PPE1	P38796	400 aa		2.53	□□□□□ -2
CSN9	YDR179C	RET2	P43621	546 aa		2.53	□□□□□ -2
CSN9	YDR179C	YIP4	P53093	235 aa		2.53	□□□□□ -2
CSN9	YDR179C	MFM1	Q02783	413 aa		2.53	□□□□□ -2
CSN9	YDR179C	EFR3	Q03653	782 aa	Known RBP	2.53	□□□□□ -2
CSN9	YDR179C	ENT2	Q05785	613 aa		2.53	□□□□□ -2
CSN9	YDR179C	NTG2	Q08214	380 aa		2.53	□□□□□ -2
CSN9	YDR179C	GEP3	Q08622	556 aa		2.53	□□□□□ -2
CSN9	YDR179C	SWI6	P09959	803 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	IME1	P21190	360 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	CNE1	P27825	502 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	CAP1	P28495	268 aa	Known RBP	2.52	□□□□□ -2.01
CSN9	YDR179C	YEL025C	P39991	1188 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	JHD1	P40034	492 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	TMN3	P40071	706 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	PCI8	P40512	444 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	MNT3	P40549	630 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	BUD8	P41698	603 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	IRC8	P47046	822 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	MET13	P53128	600 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	RCR2	Q03446	210 aa	Known RBP	2.52	□□□□□ -2.01
CSN9	YDR179C	TDA9	Q04545	1251 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	AIM41	Q12032	185 aa		2.52	□□□□□ -2.01
CSN9	YDR179C	TUF1	P02992	437 aa	Known RBP	2.51	□□□□□ -2.01
CSN9	YDR179C	ECM32	P32644	1121 aa	Known RBP	2.51	□□□□□ -2.01
CSN9	YDR179C	RGT1	P32862	1170 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	MRPL7	P36519	292 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	BRN1	P38170	754 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	MGS1	P40151	587 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	MEP2	P41948	499 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	ENP2	P48234	707 aa	Known RBP	2.51	□□□□□ -2.01
CSN9	YDR179C	TAF4	P50105	388 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	YGR054W	P53235	642 aa	Known RBP	2.51	□□□□□ -2.01
CSN9	YDR179C	BUD17	P53727	317 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	YNL193W	P53870	558 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	YNL018C	P53976	612 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	IDP3	P53982	420 aa	Known RBP	2.51	□□□□□ -2.01
CSN9	YDR179C	YLR001C	Q07895	862 aa		2.51	□□□□□ -2.01
CSN9	YDR179C	RPS17A	P02407	136 aa	Known RBP	2.5	□□□□□ -2.01
CSN9	YDR179C	RPS17B	P14127	136 aa	Known RBP	2.5	□□□□□ -2.01
CSN9	YDR179C	HOP1	P20050	605 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	URE2	P23202	354 aa	Known RBP	2.5	□□□□□ -2.01
CSN9	YDR179C	GSY2	P27472	705 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	PRE4	P30657	266 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	SFP1	P32432	683 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	ASK1	P35734	292 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	CKB2	P38930	258 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	DUN1	P39009	513 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	YJL043W	P47053	257 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	NOP15	P53927	220 aa	Predicted RBP	2.5	□□□□□ -2.01
CSN9	YDR179C	TFB2	Q02939	513 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	YPS7	Q06325	596 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	BSP1	Q06604	576 aa		2.5	□□□□□ -2.01
CSN9	YDR179C	RDL1	Q12305	139 aa	Known RBP	2.5	□□□□□ -2.01
CSN9	YDR179C	CRG1	P38892	291 aa	RIP-Chip data	2.49	□□□□□ -2.01	not detected
CSN9	YDR179C	EXO1	P39875	702 aa		2.49	□□□□□ -2.01
CSN9	YDR179C	FTR1	P40088	404 aa		2.49	□□□□□ -2.01
CSN9	YDR179C	YIL092W	P40497	633 aa		2.49	□□□□□ -2.01
CSN9	YDR179C	SDA1	P53313	767 aa	Known RBP	2.49	□□□□□ -2.01
CSN9	YDR179C	SCW4	P53334	386 aa	Known RBP	2.49	□□□□□ -2.01
CSN9	YDR179C	YNL058C	P53947	316 aa		2.49	□□□□□ -2.01
CSN9	YDR179C	MRPL1	Q04599	285 aa		2.49	□□□□□ -2.01
CSN9	YDR179C	FPR4	Q06205	392 aa	Predicted RBP	2.49	□□□□□ -2.01
CSN9	YDR179C	STP4	Q07351	490 aa		2.49	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms