RNA–Protein interactions for RNA: YDR067C

OCA6, Transcript of Cytoplasmic protein required for replication of Brome mosaic virus, yeast

Gene OCA6, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OCA6	YDR067C	ERG11	P10614	530 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	TMN3	P40071	706 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	CCT5	P40413	562 aa	Known RBP	4.19	□□□□□ -1.74
OCA6	YDR067C	SPO1	P53541	631 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	SNF12	P53628	566 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	ECM9	Q02202	377 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	TRS23	Q03784	219 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	YDR179W-A	Q03983	463 aa		4.19	□□□□□ -1.74
OCA6	YDR067C	TPK2	P06245	380 aa		4.18	□□□□□ -1.74
OCA6	YDR067C	ADE5,7	P07244	802 aa	Known RBP	4.18	□□□□□ -1.74
OCA6	YDR067C	GLN4	P13188	809 aa	Known RBP	4.18	□□□□□ -1.74
OCA6	YDR067C	UGP1	P32861	499 aa	Known RBP	4.18	□□□□□ -1.74
OCA6	YDR067C	GZF3	P42944	551 aa	Known RBP	4.18	□□□□□ -1.74
OCA6	YDR067C	SEG1	Q04279	960 aa		4.18	□□□□□ -1.74
OCA6	YDR067C	YTM1	Q12024	460 aa	Predicted RBP	4.18	□□□□□ -1.74
OCA6	YDR067C	YMC1	P32331	307 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	OAF3	P36023	863 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	PPE1	P38796	400 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	HXT6	P39003	570 aa	Known RBP	4.17	□□□□□ -1.74
OCA6	YDR067C	HXT7	P39004	570 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	TAF4	P50105	388 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	DAK1	P54838	584 aa	Known RBP	4.17	□□□□□ -1.74
OCA6	YDR067C	SEC5	P89102	971 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	PTA1	Q01329	785 aa	Predicted RBP	4.17	□□□□□ -1.74
OCA6	YDR067C	ULA1	Q12059	462 aa		4.17	□□□□□ -1.74
OCA6	YDR067C	TUP1	P16649	713 aa		4.16	□□□□□ -1.74
OCA6	YDR067C	OAF1	P39720	1047 aa	Predicted RBP	4.16	□□□□□ -1.74
OCA6	YDR067C	THI6	P41835	540 aa		4.16	□□□□□ -1.74
OCA6	YDR067C	GAT1	P43574	510 aa		4.16	□□□□□ -1.74
OCA6	YDR067C	YNR029C	P53729	429 aa	Known RBP	4.16	□□□□□ -1.74
OCA6	YDR067C	TIM50	Q02776	476 aa		4.16	□□□□□ -1.74
OCA6	YDR067C	FAP7	Q12055	197 aa	Predicted RBP	4.16	□□□□□ -1.74
OCA6	YDR067C	NUP1	P20676	1076 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	PRE4	P30657	266 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	FAT1	P38225	669 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	YHR033W	P38690	423 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	RIM4	P38741	713 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	CRG1	P38892	291 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
OCA6	YDR067C	FPR3	P38911	411 aa	Known RBP	4.15	□□□□□ -1.75
OCA6	YDR067C	VID28	P40547	921 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	IES1	P43579	692 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	MNN11	P46985	422 aa	Known RBP	4.15	□□□□□ -1.75
OCA6	YDR067C	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
OCA6	YDR067C	YGR237C	P50089	785 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	MFM1	Q02783	413 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	FDC1	Q03034	503 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	HFD1	Q04458	532 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	HFI1	Q12060	488 aa		4.15	□□□□□ -1.75
OCA6	YDR067C	RPS21A	P0C0V8	87 aa	Known RBP	4.14	□□□□□ -1.75
OCA6	YDR067C	STE4	P18851	423 aa		4.14	□□□□□ -1.75
OCA6	YDR067C	FTR1	P40088	404 aa		4.14	□□□□□ -1.75
OCA6	YDR067C	NSE5	Q03718	556 aa		4.14	□□□□□ -1.75
OCA6	YDR067C	DID4	P36108	232 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	PIH1	P38768	344 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	XBP1	P40489	647 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	PRM2	P40534	656 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	GPP1	P41277	250 aa	Known RBP	4.13	□□□□□ -1.75
OCA6	YDR067C	YIP4	P53093	235 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	GPG1	P53130	126 aa		4.13	□□□□□ -1.75
OCA6	YDR067C	YGR054W	P53235	642 aa	Known RBP	4.13	□□□□□ -1.75
OCA6	YDR067C	MRPL7	P36519	292 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	TAX4	P47030	604 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	HLR1	Q04429	423 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	YPL216W	Q08964	1102 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	AIM41	Q12032	185 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	APM4	Q99186	491 aa		4.12	□□□□□ -1.75
OCA6	YDR067C	PGK1	P00560	416 aa	Known RBP	4.11	□□□□□ -1.75
OCA6	YDR067C	CDC26	P14724	124 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	PTP1	P25044	335 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	CDS1	P38221	457 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	YEL025C	P39991	1188 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	NET1	P47035	1189 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	YGL117W	P53133	265 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	CPR8	P53728	308 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	EFR3	Q03653	782 aa	Known RBP	4.11	□□□□□ -1.75
OCA6	YDR067C	CEF1	Q03654	590 aa	Predicted RBP	4.11	□□□□□ -1.75
OCA6	YDR067C	ARG7	Q04728	441 aa		4.11	□□□□□ -1.75
OCA6	YDR067C	AAD3	P25612	363 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	DGR2	P32330	852 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	DHR2	P36009	735 aa	Predicted RBP	4.1	□□□□□ -1.75
OCA6	YDR067C	EHT1	P38295	451 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	ENP2	P48234	707 aa	Known RBP	4.1	□□□□□ -1.75
OCA6	YDR067C	RNR4	P49723	345 aa	Known RBP	4.1	□□□□□ -1.75
OCA6	YDR067C	YCG1	Q06680	1035 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	ZPS1	Q12512	249 aa		4.1	□□□□□ -1.75
OCA6	YDR067C	ATG36	P46983	293 aa		4.09	□□□□□ -1.75
OCA6	YDR067C	BUD17	P53727	317 aa		4.09	□□□□□ -1.75
OCA6	YDR067C	YDL073W	Q07454	984 aa		4.09	□□□□□ -1.75
OCA6	YDR067C	AI5_ALPHA	Q9ZZX1	630 aa		4.09	□□□□□ -1.75
OCA6	YDR067C	HMG2	P12684	1045 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
OCA6	YDR067C	APN1	P22936	367 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	MBR1	P23493	339 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	MF(ALPHA)2	P32435	120 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	DAL3	P32459	195 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	HOT13	P36078	116 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	LTP1	P40347	161 aa		4.08	□□□□□ -1.76
OCA6	YDR067C	SQS1	P53866	767 aa	Known RBP	4.08	□□□□□ -1.76
OCA6	YDR067C	CPA2	P03965	1118 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms