RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	POM152	P39685	1337 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	IRC20	Q06554	1556 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	APL1	P27351	700 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	GYP6	P32806	458 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	SLA2	P33338	968 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	YKL151C	P36059	337 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	TFG1	P41895	735 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO21	YDL140C	YGR283C	P53336	341 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO21	YDL140C	CSL4	P53859	292 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO21	YDL140C	RCF1	Q03713	159 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	RVB1	Q03940	463 aa	Known RBP	3.93	□□□□□ -1.78
RPO21	YDL140C	BOP2	Q06150	570 aa		3.93	□□□□□ -1.78
RPO21	YDL140C	IWR1	Q07532	353 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO21	YDL140C	MLP2	P40457	1679 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	CYC8	P14922	966 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	SRB5	P32585	307 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	GLG1	P36143	616 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	SRP72	P38688	640 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	YAP1801	P38856	637 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YTA12	P40341	825 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YRB1	P41920	201 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	RTT101	P47050	842 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	HOC1	P47124	396 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	BIR1	P47134	954 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	UPF3	P48412	387 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	GCN5	Q03330	439 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YPQ2	Q06328	317 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	PMT7	Q06644	662 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YKR104W	P0CE69	306 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	MTF1	P14908	341 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	COT1	P32798	439 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	RFC5	P38251	354 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YBR259W	P38338	688 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YJL193W	P39542	402 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	CCT5	P40413	562 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	AIM21	P40563	679 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	CTF18	P49956	741 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	RPA49	Q01080	415 aa	Predicted RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	PGC1	Q08959	321 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	DBP1	P24784	617 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	STE13	P33894	931 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	PPE1	P38796	400 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	ALA1	P40825	983 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	BIT61	P47041	543 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	PEX31	P53203	462 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	COQ6	P53318	479 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YNL115C	P53925	644 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	ARA2	Q04212	335 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	RRB1	Q04225	511 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	VMS1	Q04311	632 aa	Known RBP	3.92	□□□□□ -1.78
RPO21	YDL140C	TOS4	Q06266	489 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	TPO1	Q07824	586 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YPL272C	Q08984	517 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YDR524C-B	Q3E6R4	66 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	ADK2	P26364	225 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	NEM1	P38757	446 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	CHS7	P38843	316 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	NUP85	P46673	744 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	UBA2	P52488	636 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	ALT1	P52893	592 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	TIM8	P57744	87 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	USA1	Q03714	838 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	ERV41	Q04651	352 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	DIC1	Q06143	298 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	GMC2	Q06201	188 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YLL054C	Q12244	843 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	GPR1	Q12361	961 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	YOS9	Q99220	542 aa		3.92	□□□□□ -1.78
RPO21	YDL140C	MAK31	P23059	88 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	SPB1	P25582	841 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	BCS1	P32839	456 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	CTF13	P35203	478 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	APE4	P38821	490 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	RPC17	P47076	161 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	TRM9	P49957	279 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	YNL140C	P53910	189 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	YPL109C	Q02981	657 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	DIG2	Q03373	323 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	ADI1	Q03677	179 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	TRS120	Q04183	1289 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	OPT2	Q06593	877 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	NEW1	Q08972	1196 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	YOL087C	Q99247	1116 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	MPD2	Q99316	277 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	HEM12	P32347	362 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	CRP1	P38845	465 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	PRM2	P40534	656 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	FAF1	P40546	346 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	NKP2	Q06162	153 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	YLR456W	Q06199	204 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	NDE2	Q07500	545 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	CLP1	Q08685	445 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	TMA16	Q08687	178 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	PGI1	P12709	554 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	RNR3	P21672	869 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	SNT1	P25357	1226 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	RRT12	P25381	491 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	UBP14	P38237	781 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	TSL1	P38427	1098 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	CBR1	P38626	284 aa	Known RBP	3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms