RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C MFM1Q02783 413 aa3.73□□□□□ -1.81
ASM4YDL088C RPS17AP02407 136 aaKnown RBP3.72□□□□□ -1.81
ASM4YDL088C RPS17BP14127 136 aaKnown RBP3.72□□□□□ -1.81
ASM4YDL088C STE4P18851 423 aa3.72□□□□□ -1.81
ASM4YDL088C PRP19P32523 503 aaKnown RBP3.72□□□□□ -1.81
ASM4YDL088C RRP14P36080 434 aaKnown RBP3.72□□□□□ -1.81
ASM4YDL088C CKB2P38930 258 aa3.72□□□□□ -1.81
ASM4YDL088C YGR153WP48238 217 aa3.72□□□□□ -1.81
ASM4YDL088C CPR8P53728 308 aa3.72□□□□□ -1.81
ASM4YDL088C ALG12P53730 551 aa3.72□□□□□ -1.81
ASM4YDL088C ARG7Q04728 441 aa3.72□□□□□ -1.81
ASM4YDL088C ORM2Q06144 216 aa3.72□□□□□ -1.81
ASM4YDL088C AI5_ALPHAQ9ZZX1 630 aa3.72□□□□□ -1.81
ASM4YDL088C RPL8AP17076 256 aaKnown RBP3.72□□□□□ -1.81
ASM4YDL088C IME1P21190 360 aa3.72□□□□□ -1.81
ASM4YDL088C HLJ1P48353 224 aa3.72□□□□□ -1.81
ASM4YDL088C YGL117WP53133 265 aa3.72□□□□□ -1.81
ASM4YDL088C RNH70P53331 553 aa3.72□□□□□ -1.81
ASM4YDL088C SWI6P09959 803 aa3.71□□□□□ -1.82
ASM4YDL088C CCT5P40413 562 aaKnown RBP3.71□□□□□ -1.82
ASM4YDL088C YJR096WP47137 282 aa3.71□□□□□ -1.82
ASM4YDL088C TAF4P50105 388 aa3.71□□□□□ -1.82
ASM4YDL088C NOP15P53927 220 aaPredicted RBP3.71□□□□□ -1.82
ASM4YDL088C CEF1Q03654 590 aaPredicted RBP3.71□□□□□ -1.82
ASM4YDL088C STP4Q07351 490 aa3.71□□□□□ -1.82
ASM4YDL088C RGT2Q12300 763 aa3.71□□□□□ -1.82
ASM4YDL088C ZPS1Q12512 249 aa3.71□□□□□ -1.82
ASM4YDL088C ADR1P07248 1323 aa3.7□□□□□ -1.82
ASM4YDL088C SEC65P29478 273 aa3.7□□□□□ -1.82
ASM4YDL088C YIP4P53093 235 aa3.7□□□□□ -1.82
ASM4YDL088C TIM50Q02776 476 aa3.7□□□□□ -1.82
ASM4YDL088C FDC1Q03034 503 aa3.7□□□□□ -1.82
ASM4YDL088C YPL216WQ08964 1102 aa3.7□□□□□ -1.82
ASM4YDL088C MRPL9P31334 269 aa3.69□□□□□ -1.82
ASM4YDL088C MNN1P39106 762 aa3.69□□□□□ -1.82
ASM4YDL088C YDL073WQ07454 984 aa3.69□□□□□ -1.82
ASM4YDL088C HEM1P09950 548 aaPredicted RBP3.68□□□□□ -1.82
ASM4YDL088C TUP1P16649 713 aa3.68□□□□□ -1.82
ASM4YDL088C PRE4P30657 266 aa3.68□□□□□ -1.82
ASM4YDL088C TYS1P36421 394 aaKnown RBP3.68□□□□□ -1.82
ASM4YDL088C YGR054WP53235 642 aaKnown RBP3.68□□□□□ -1.82
ASM4YDL088C STP1Q00947 519 aa3.68□□□□□ -1.82
ASM4YDL088C EFR3Q03653 782 aaKnown RBP3.68□□□□□ -1.82
ASM4YDL088C YHM2Q04013 314 aa3.68□□□□□ -1.82
ASM4YDL088C IRC3Q06683 689 aa3.68□□□□□ -1.82
ASM4YDL088C RPS21BQ3E754 87 aaKnown RBP3.68□□□□□ -1.82
ASM4YDL088C MBR1P23493 339 aa3.68□□□□□ -1.82
ASM4YDL088C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
ASM4YDL088C DHR2P36009 735 aaPredicted RBP3.68□□□□□ -1.82
ASM4YDL088C YHR033WP38690 423 aa3.68□□□□□ -1.82
ASM4YDL088C CRG1P38892 291 aaRIP-Chip data3.68□□□□□ -1.82not detected
ASM4YDL088C YEL025CP39991 1188 aa3.68□□□□□ -1.82
ASM4YDL088C FTR1P40088 404 aa3.68□□□□□ -1.82
ASM4YDL088C ULP2P40537 1034 aaPredicted RBP3.68□□□□□ -1.82
ASM4YDL088C PIP2P52960 996 aa3.68□□□□□ -1.82
ASM4YDL088C ATP23P53722 227 aa3.68□□□□□ -1.82
ASM4YDL088C DNM1P54861 757 aa3.68□□□□□ -1.82
ASM4YDL088C THI73Q07904 523 aa3.68□□□□□ -1.82
ASM4YDL088C CPA2P03965 1118 aaKnown RBP3.67□□□□□ -1.82
ASM4YDL088C GLN4P13188 809 aaKnown RBP3.67□□□□□ -1.82
ASM4YDL088C MRPL7P36519 292 aa3.67□□□□□ -1.82
ASM4YDL088C YJL043WP47053 257 aa3.67□□□□□ -1.82
ASM4YDL088C NSE5Q03718 556 aa3.67□□□□□ -1.82
ASM4YDL088C UTP14Q04500 899 aaKnown RBP3.67□□□□□ -1.82
ASM4YDL088C AIM41Q12032 185 aa3.67□□□□□ -1.82
ASM4YDL088C RPL7AP05737 244 aaKnown RBP3.66□□□□□ -1.82
ASM4YDL088C PMA2P19657 947 aa3.66□□□□□ -1.82
ASM4YDL088C CNE1P27825 502 aa3.66□□□□□ -1.82
ASM4YDL088C PSA1P41940 361 aaKnown RBP3.66□□□□□ -1.82
ASM4YDL088C COQ6P53318 479 aa3.66□□□□□ -1.82
ASM4YDL088C BUD17P53727 317 aa3.66□□□□□ -1.82
ASM4YDL088C MPS1P54199 764 aa3.66□□□□□ -1.82
ASM4YDL088C PTA1Q01329 785 aaPredicted RBP3.66□□□□□ -1.82
ASM4YDL088C HLR1Q04429 423 aa3.66□□□□□ -1.82
ASM4YDL088C RPL7BQ12213 244 aaKnown RBP3.66□□□□□ -1.82
ASM4YDL088C PRM2P40534 656 aa3.65□□□□□ -1.82
ASM4YDL088C IES1P43579 692 aa3.65□□□□□ -1.82
ASM4YDL088C ECM9Q02202 377 aa3.65□□□□□ -1.82
ASM4YDL088C MTQ2Q03920 221 aaPredicted RBP3.65□□□□□ -1.82
ASM4YDL088C GFD1Q04839 188 aaKnown RBP3.65□□□□□ -1.82
ASM4YDL088C TGS1Q12052 315 aa3.65□□□□□ -1.82
ASM4YDL088C WHI2P12611 486 aa3.64□□□□□ -1.83
ASM4YDL088C BEM3P32873 1128 aa3.64□□□□□ -1.83
ASM4YDL088C RPC34P32910 317 aa3.64□□□□□ -1.83
ASM4YDL088C LOT5P34234 306 aa3.64□□□□□ -1.83
ASM4YDL088C VID28P40547 921 aa3.64□□□□□ -1.83
ASM4YDL088C GZF3P42944 551 aaKnown RBP3.64□□□□□ -1.83
ASM4YDL088C OAF3P36023 863 aa3.63□□□□□ -1.83
ASM4YDL088C CDS1P38221 457 aa3.63□□□□□ -1.83
ASM4YDL088C HXT6P39003 570 aaKnown RBP3.63□□□□□ -1.83
ASM4YDL088C HXT7P39004 570 aa3.63□□□□□ -1.83
ASM4YDL088C SCS3P53012 380 aa3.63□□□□□ -1.83
ASM4YDL088C YTM1Q12024 460 aaPredicted RBP3.63□□□□□ -1.83
ASM4YDL088C NUP145P49687 1317 aa3.63□□□□□ -1.83
ASM4YDL088C YMR084WA2P2R3 262 aa3.63□□□□□ -1.83
ASM4YDL088C LEU2P04173 364 aaPredicted RBP3.63□□□□□ -1.83
ASM4YDL088C AQY1P0CD91 305 aa3.63□□□□□ -1.83
ASM4YDL088C CAP1P28495 268 aaKnown RBP3.63□□□□□ -1.83
ASM4YDL088C APD1P38281 316 aa3.63□□□□□ -1.83
ASM4YDL088C EHT1P38295 451 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms