RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C FRD1P32614 470 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C SLA2P33338 968 aa1.13□□□□□ -2.23
VAM6YDL077C VPS35P34110 944 aa1.13□□□□□ -2.23
VAM6YDL077C PRX1P34227 261 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C YKL222CP35995 705 aa1.13□□□□□ -2.23
VAM6YDL077C GRS1P38088 690 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C KTR4P38131 464 aa1.13□□□□□ -2.23
VAM6YDL077C TOS1P38288 455 aa1.13□□□□□ -2.23
VAM6YDL077C MMS21P38632 267 aa1.13□□□□□ -2.23
VAM6YDL077C YHR020WP38708 688 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C PIK1P39104 1066 aa1.13□□□□□ -2.23
VAM6YDL077C DSS1P39112 969 aa1.13□□□□□ -2.23
VAM6YDL077C MBP1P39678 833 aa1.13□□□□□ -2.23
VAM6YDL077C SSP120P39931 234 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C EMP65P40085 556 aa1.13□□□□□ -2.23
VAM6YDL077C JEM1P40358 645 aa1.13□□□□□ -2.23
VAM6YDL077C DIM1P41819 318 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C NOP9P47077 666 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C TMA22P47089 198 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C IMD3P50095 523 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C TEL2P53038 688 aa1.13□□□□□ -2.23
VAM6YDL077C MTO1P53070 669 aa1.13□□□□□ -2.23
VAM6YDL077C NMA2P53204 395 aa1.13□□□□□ -2.23
VAM6YDL077C YGR111WP53265 400 aa1.13□□□□□ -2.23
VAM6YDL077C MRPL50P53724 139 aa1.13□□□□□ -2.23
VAM6YDL077C ORC4P54791 529 aa1.13□□□□□ -2.23
VAM6YDL077C ADA2Q02336 434 aa1.13□□□□□ -2.23
VAM6YDL077C RRN5Q02983 363 aa1.13□□□□□ -2.23
VAM6YDL077C EMI2Q04409 500 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C SEC10Q06245 871 aa1.13□□□□□ -2.23
VAM6YDL077C EAF1Q06337 982 aa1.13□□□□□ -2.23
VAM6YDL077C THI22Q06490 572 aa1.13□□□□□ -2.23
VAM6YDL077C AOS1Q06624 347 aa1.13□□□□□ -2.23
VAM6YDL077C MCM21Q06675 368 aa1.13□□□□□ -2.23
VAM6YDL077C REH1Q06709 432 aa1.13□□□□□ -2.23
VAM6YDL077C DTD1Q07648 150 aaKnown RBP1.13□□□□□ -2.23
VAM6YDL077C UIP4Q08926 304 aa1.13□□□□□ -2.23
VAM6YDL077C YOR223WQ12015 292 aa1.13□□□□□ -2.23
VAM6YDL077C FAP7Q12055 197 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C YOR214CQ12282 236 aa1.13□□□□□ -2.23
VAM6YDL077C NTO1Q12311 748 aa1.13□□□□□ -2.23
VAM6YDL077C SNU23Q12368 194 aaPredicted RBP1.13□□□□□ -2.23
VAM6YDL077C NCA2Q12374 616 aa1.13□□□□□ -2.23
VAM6YDL077C CBP2P03874 630 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C AI3P03877 415 aa1.12□□□□□ -2.23
VAM6YDL077C PAB1P04147 577 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
VAM6YDL077C RPL25P04456 142 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C RPL6BP05739 176 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C VMA6P32366 345 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C SAC6P32599 642 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C XRS2P33301 854 aa1.12□□□□□ -2.23
VAM6YDL077C RIB7P33312 244 aa1.12□□□□□ -2.23
VAM6YDL077C ABZ1P37254 787 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C ALG3P38179 458 aa1.12□□□□□ -2.23
VAM6YDL077C CBR1P38626 284 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C RRF1P38771 230 aa1.12□□□□□ -2.23
VAM6YDL077C TRM5P38793 499 aa1.12□□□□□ -2.23
VAM6YDL077C UTP9P38882 575 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C YJR061WP40355 935 aa1.12□□□□□ -2.23
VAM6YDL077C PFK26P40433 827 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C EFM4P40516 257 aa1.12□□□□□ -2.23
VAM6YDL077C PAC11P40960 533 aa1.12□□□□□ -2.23
VAM6YDL077C IRC5P43610 853 aa1.12□□□□□ -2.23
VAM6YDL077C LSM1P47017 172 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ECL1P48235 211 aa1.12□□□□□ -2.23
VAM6YDL077C PSP1P50896 841 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C HFM1P51979 1187 aa1.12□□□□□ -2.23
VAM6YDL077C CUE3P53137 624 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C YGL108CP53139 140 aa1.12□□□□□ -2.23
VAM6YDL077C YGL082WP53155 381 aa1.12□□□□□ -2.23
VAM6YDL077C YGR067CP53243 804 aa1.12□□□□□ -2.23
VAM6YDL077C CAF130P53280 1122 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C DIP5P53388 608 aa1.12□□□□□ -2.23
VAM6YDL077C SNF12P53628 566 aa1.12□□□□□ -2.23
VAM6YDL077C MNT4P53745 580 aa1.12□□□□□ -2.23
VAM6YDL077C YNR063WP53749 607 aa1.12□□□□□ -2.23
VAM6YDL077C ELA1P53861 379 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C COG6P53959 839 aa1.12□□□□□ -2.23
VAM6YDL077C SPC19Q03954 165 aa1.12□□□□□ -2.23
VAM6YDL077C UTP5Q04177 643 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C SPC2Q04969 178 aa1.12□□□□□ -2.23
VAM6YDL077C ARR2Q06597 130 aa1.12□□□□□ -2.23
VAM6YDL077C PMT7Q06644 662 aa1.12□□□□□ -2.23
VAM6YDL077C BRE1Q07457 700 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
VAM6YDL077C MSC6Q08818 692 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ATG34Q12292 412 aa1.12□□□□□ -2.23
VAM6YDL077C YDR061WQ12298 539 aa1.12□□□□□ -2.23
VAM6YDL077C MED4Q12343 284 aa1.12□□□□□ -2.23
VAM6YDL077C YHR213W-AQ8TGT4 77 aa1.12□□□□□ -2.23
VAM6YDL077C FLO11P08640 1367 aa1.12□□□□□ -2.23
VAM6YDL077C INH1P01097 85 aa1.12□□□□□ -2.23
VAM6YDL077C ADE8P04161 214 aa1.12□□□□□ -2.23
VAM6YDL077C MATALPHA2P0CY08 210 aa1.12□□□□□ -2.23
VAM6YDL077C HMLALPHA2P0CY09 210 aa1.12□□□□□ -2.23
VAM6YDL077C HMG2P12684 1045 aa1.12□□□□□ -2.23
VAM6YDL077C RED1P14291 827 aa1.12□□□□□ -2.23
VAM6YDL077C CMP2P14747 604 aa1.12□□□□□ -2.23
VAM6YDL077C MRPL8P22353 238 aa1.12□□□□□ -2.23
VAM6YDL077C DPB2P24482 689 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms