RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	IZH3	Q07959	543 aa		5	□□□□□ -1.61
APA1	YCL050C	TRE2	Q08693	809 aa		5	□□□□□ -1.61
APA1	YCL050C	MDM20	Q12387	796 aa	Known RBP	5	□□□□□ -1.61
APA1	YCL050C	TUB1	P09733	447 aa	Known RBP	4.99	□□□□□ -1.61
APA1	YCL050C	ILV6	P25605	309 aa	Known RBP	4.99	□□□□□ -1.61
APA1	YCL050C	DAL3	P32459	195 aa		4.99	□□□□□ -1.61
APA1	YCL050C	GRX4	P32642	244 aa		4.99	□□□□□ -1.61
APA1	YCL050C	PEX2	P32800	271 aa		4.99	□□□□□ -1.61
APA1	YCL050C	MUP3	P38734	546 aa		4.99	□□□□□ -1.61
APA1	YCL050C	LGE1	Q02796	332 aa	Known RBP	4.99	□□□□□ -1.61
APA1	YCL050C	FDC1	Q03034	503 aa		4.99	□□□□□ -1.61
APA1	YCL050C	AIM41	Q12032	185 aa		4.99	□□□□□ -1.61
APA1	YCL050C	BNR1	P40450	1375 aa		4.99	□□□□□ -1.61
APA1	YCL050C	STE12	P13574	688 aa		4.98	□□□□□ -1.61
APA1	YCL050C	CDC26	P14724	124 aa		4.98	□□□□□ -1.61
APA1	YCL050C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
APA1	YCL050C	AEP2	P22136	580 aa		4.98	□□□□□ -1.61
APA1	YCL050C	RPA135	P22138	1203 aa	Known RBP	4.98	□□□□□ -1.61
APA1	YCL050C	PPE1	P38796	400 aa		4.98	□□□□□ -1.61
APA1	YCL050C	CRG1	P38892	291 aa	RIP-Chip data	4.98	□□□□□ -1.61	RIP-Chip
APA1	YCL050C	PRM2	P40534	656 aa		4.98	□□□□□ -1.61
APA1	YCL050C	THI6	P41835	540 aa		4.98	□□□□□ -1.61
APA1	YCL050C	DAK1	P54838	584 aa	Known RBP	4.98	□□□□□ -1.61
APA1	YCL050C	NGL2	Q03264	515 aa	Known RBP	4.98	□□□□□ -1.61
APA1	YCL050C	SKY1	Q03656	742 aa		4.98	□□□□□ -1.61
APA1	YCL050C	MF(ALPHA)2	P32435	120 aa		4.97	□□□□□ -1.61
APA1	YCL050C	EUG1	P32474	517 aa		4.97	□□□□□ -1.61
APA1	YCL050C	FTR1	P40088	404 aa		4.97	□□□□□ -1.61
APA1	YCL050C	PEA2	P40091	420 aa		4.97	□□□□□ -1.61
APA1	YCL050C	TIM50	Q02776	476 aa		4.97	□□□□□ -1.61
APA1	YCL050C	ARO10	Q06408	635 aa		4.97	□□□□□ -1.61
APA1	YCL050C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
APA1	YCL050C	TUP1	P16649	713 aa		4.96	□□□□□ -1.62
APA1	YCL050C	YMC2	P38087	329 aa		4.96	□□□□□ -1.62
APA1	YCL050C	GPP2	P40106	250 aa	Known RBP	4.96	□□□□□ -1.62
APA1	YCL050C	SPC105	P53148	917 aa		4.96	□□□□□ -1.62
APA1	YCL050C	SQS1	P53866	767 aa	Known RBP	4.96	□□□□□ -1.62
APA1	YCL050C	CEF1	Q03654	590 aa	Predicted RBP	4.96	□□□□□ -1.62
APA1	YCL050C	TRS23	Q03784	219 aa		4.96	□□□□□ -1.62
APA1	YCL050C	YDR179W-A	Q03983	463 aa		4.96	□□□□□ -1.62
APA1	YCL050C	HLR1	Q04429	423 aa		4.96	□□□□□ -1.62
APA1	YCL050C	NGL1	Q08213	363 aa	Known RBP	4.96	□□□□□ -1.62
APA1	YCL050C	TMA17	Q12513	150 aa		4.96	□□□□□ -1.62
APA1	YCL050C	HXT4	P32467	576 aa		4.95	□□□□□ -1.62
APA1	YCL050C	SER1	P33330	395 aa	Known RBP	4.95	□□□□□ -1.62
APA1	YCL050C	PMC1	P38929	1173 aa	Predicted RBP	4.95	□□□□□ -1.62
APA1	YCL050C	YEL025C	P39991	1188 aa		4.95	□□□□□ -1.62
APA1	YCL050C	SNF12	P53628	566 aa		4.95	□□□□□ -1.62
APA1	YCL050C	MFM1	Q02783	413 aa		4.95	□□□□□ -1.62
APA1	YCL050C	YCG1	Q06680	1035 aa		4.95	□□□□□ -1.62
APA1	YCL050C	PHO5	P00635	467 aa		4.94	□□□□□ -1.62
APA1	YCL050C	CDS1	P38221	457 aa		4.94	□□□□□ -1.62
APA1	YCL050C	NIT2	P47016	307 aa		4.94	□□□□□ -1.62
APA1	YCL050C	MRK1	P50873	501 aa		4.94	□□□□□ -1.62
APA1	YCL050C	YGR054W	P53235	642 aa	Known RBP	4.94	□□□□□ -1.62
APA1	YCL050C	YML122C	Q03207	126 aa		4.94	□□□□□ -1.62
APA1	YCL050C	NDJ1	Q12366	352 aa		4.94	□□□□□ -1.62
APA1	YCL050C	HMG2	P12684	1045 aa		4.93	□□□□□ -1.62
APA1	YCL050C	ATP12	P22135	325 aa		4.93	□□□□□ -1.62
APA1	YCL050C	SAT4	P25333	603 aa	Known RBP	4.93	□□□□□ -1.62
APA1	YCL050C	DHR2	P36009	735 aa	Predicted RBP	4.93	□□□□□ -1.62
APA1	YCL050C	YBR071W	P38243	211 aa		4.93	□□□□□ -1.62
APA1	YCL050C	SRP68	P38687	599 aa	Known RBP	4.93	□□□□□ -1.62
APA1	YCL050C	PAC2	P39937	518 aa		4.93	□□□□□ -1.62
APA1	YCL050C	MIT1	P40002	666 aa		4.93	□□□□□ -1.62
APA1	YCL050C	ASN1	P49089	572 aa	Known RBP	4.93	□□□□□ -1.62
APA1	YCL050C	SLD3	P53135	668 aa		4.93	□□□□□ -1.62
APA1	YCL050C	SLK19	Q08581	821 aa	Known RBP	4.93	□□□□□ -1.62
APA1	YCL050C	YPL216W	Q08964	1102 aa		4.93	□□□□□ -1.62
APA1	YCL050C	TPK2	P06245	380 aa		4.92	□□□□□ -1.62
APA1	YCL050C	COX11	P19516	300 aa	Known RBP	4.92	□□□□□ -1.62
APA1	YCL050C	UGP1	P32861	499 aa	Known RBP	4.92	□□□□□ -1.62
APA1	YCL050C	YPT53	P36019	220 aa		4.92	□□□□□ -1.62
APA1	YCL050C	FLO10	P36170	1169 aa		4.92	□□□□□ -1.62
APA1	YCL050C	EHT1	P38295	451 aa		4.92	□□□□□ -1.62
APA1	YCL050C	RIM4	P38741	713 aa		4.92	□□□□□ -1.62
APA1	YCL050C	PIH1	P38768	344 aa		4.92	□□□□□ -1.62
APA1	YCL050C	YJR120W	P47157	116 aa		4.92	□□□□□ -1.62
APA1	YCL050C	IMO32	P53219	342 aa		4.92	□□□□□ -1.62
APA1	YCL050C	EFR3	Q03653	782 aa	Known RBP	4.92	□□□□□ -1.62
APA1	YCL050C	TUF1	P02992	437 aa	Known RBP	4.91	□□□□□ -1.62
APA1	YCL050C	KAR1	P11927	433 aa		4.91	□□□□□ -1.62
APA1	YCL050C	STE4	P18851	423 aa		4.91	□□□□□ -1.62
APA1	YCL050C	MTC7	P32633	139 aa		4.91	□□□□□ -1.62
APA1	YCL050C	MRPL7	P36519	292 aa		4.91	□□□□□ -1.62
APA1	YCL050C	EMP65	P40085	556 aa		4.91	□□□□□ -1.62
APA1	YCL050C	YIP4	P53093	235 aa		4.91	□□□□□ -1.62
APA1	YCL050C	MDR1	P53258	950 aa		4.91	□□□□□ -1.62
APA1	YCL050C	FMP30	Q02883	468 aa		4.91	□□□□□ -1.62
APA1	YCL050C	ADE5,7	P07244	802 aa	Known RBP	4.9	□□□□□ -1.63
APA1	YCL050C	YEL076C-A	P0CX16	216 aa		4.9	□□□□□ -1.63
APA1	YCL050C	YLR464W	P0CX17	216 aa		4.9	□□□□□ -1.63
APA1	YCL050C	YEL076C	P39971	216 aa		4.9	□□□□□ -1.63
APA1	YCL050C	ATG36	P46983	293 aa		4.9	□□□□□ -1.63
APA1	YCL050C	CWC2	Q12046	339 aa	Predicted RBP	4.9	□□□□□ -1.63
APA1	YCL050C	SSB1	P11484	613 aa	Known RBP	4.89	□□□□□ -1.63
APA1	YCL050C	SEC12	P11655	471 aa		4.89	□□□□□ -1.63
APA1	YCL050C	VPS34	P22543	875 aa		4.89	□□□□□ -1.63
APA1	YCL050C	RMA1	P36001	430 aa	Known RBP	4.89	□□□□□ -1.63
APA1	YCL050C	SSB2	P40150	613 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms